Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0648
(570 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0466 + 3702771-3703016,3703133-3703196,3703757-3704055,370... 107 8e-24
03_02_0658 + 10228794-10228943,10229042-10229105,10229510-102298... 85 4e-17
01_07_0220 + 42087390-42087645,42087883-42087989 32 0.28
07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,114... 31 0.49
03_06_0422 + 33818887-33819996 30 1.1
05_07_0367 - 29700855-29700920,29701092-29701149,29701446-297015... 29 2.0
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 29 2.0
06_03_0725 - 23894215-23894412,23894660-23894803,23895058-238951... 29 2.6
11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,331... 29 3.4
04_03_0175 + 12269091-12269561 29 3.4
11_04_0336 - 16507661-16507753,16508061-16508158,16508311-165086... 28 4.6
09_06_0269 - 21947847-21947904,21947988-21948169,21948268-219489... 28 4.6
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 28 6.0
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 28 6.0
04_04_0517 + 25841292-25842099,25842256-25842308 28 6.0
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 28 6.0
10_01_0183 + 2056891-2056947,2059136-2060089 27 8.0
08_02_0137 - 13049872-13050893,13051022-13051175 27 8.0
>05_01_0466 +
3702771-3703016,3703133-3703196,3703757-3704055,
3704666-3704881,3705216-3705422,3705697-3705789,
3706098-3706196,3706300-3706329,3706885-3706938,
3707533-3707586,3707658-3707735,3707927-3708018,
3708093-3708150,3708248-3708322,3708930-3708977,
3709131-3709228,3709446-3709521,3709659-3709721,
3709810-3709901,3710207-3710275,3710410-3710473,
3710545-3710610,3710700-3710777
Length = 772
Score = 107 bits (256), Expect = 8e-24
Identities = 53/130 (40%), Positives = 77/130 (59%)
Frame = +2
Query: 176 LLIALVGLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMALYGSHDIFRADNQQG 355
L I LVGLPARGK+ A +L R+L W G T+ F+ +YRR S D FR DN +G
Sbjct: 371 LAIVLVGLPARGKTFTAAKLTRYLRWLGHETRHFNVGKYRRLKHGANQSADFFRDDNPEG 430
Query: 356 SAIRRQSAHEAVQDAVIWLKDGNSVAIFDVTNITREQRRELSDYCLSDMGFRILFIECVC 535
R + A A++D + W+ G V IFD TN TR++R L +++ +I+F+E +C
Sbjct: 431 IEARNEVAALAMEDMIDWMHGGGQVGIFDATNSTRKRRYMLMK--MAEGNCKIIFLETIC 488
Query: 536 EDQELLERNI 565
D ++ERN+
Sbjct: 489 NDPNIIERNV 498
>03_02_0658 +
10228794-10228943,10229042-10229105,10229510-10229805,
10230689-10230904,10231409-10231549,10232407-10232499,
10234010-10234108,10234198-10234227,10234274-10234360,
10234636-10234689,10234758-10234835,10235128-10235202,
10236265-10236356,10236433-10236490,10236590-10236664,
10236966-10237013,10239003-10239065,10239167-10239258,
10239693-10239761,10239867-10239930,10240007-10240072,
10240170-10240271
Length = 703
Score = 85.0 bits (201), Expect = 4e-17
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 34/164 (20%)
Frame = +2
Query: 176 LLIALVGLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRR-RH----MALYGSH----- 325
L I LVGLPARGK+ A +L R+L W G TK F+ +YRR +H +L S+
Sbjct: 316 LAIVLVGLPARGKTFTAAKLTRYLRWLGHETKHFNVGKYRRLKHGINQTSLSASNSVEQT 375
Query: 326 -DIFRADNQQGSAIRRQSAHEAVQDAVIWLKDGNSVAIFDVTNITREQRREL----SDYC 490
D FR DN++G R + A A++D + W+++G V IFD TN TR +R L C
Sbjct: 376 ADFFRGDNKEGVEARNEVAALAMEDMLSWMQEGGQVGIFDATNSTRNRRNMLMKMAEGKC 435
Query: 491 LSD-------------------MGFRILFIECVCEDQELLERNI 565
S I+F+E +C DQ +LERN+
Sbjct: 436 KSPKLIIVPIMNINRKRRTYKAYSCTIIFLETICNDQNVLERNM 479
>01_07_0220 + 42087390-42087645,42087883-42087989
Length = 120
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 82 GSSTGHGNDGGQRETSSTRNDPLASYQSICAAPHSPGWSASSWQESAGTPTCQTSQLE 255
G S G+ N +R T++ + + + SI A+P + W+ASS + G T + S ++
Sbjct: 31 GGSGGNTNGSHRRITAAAAINIIRTLLSILASPAAVDWTASSGRRLTGCSTLRCSSVD 88
>07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,
1141770-1142063,1142145-1142337,1142624-1142694,
1142781-1144200
Length = 1254
Score = 31.5 bits (68), Expect = 0.49
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 76 RPGSSTGHGNDGGQRETSSTRNDPLASYQSICAAPH-SPGWSASSWQESA 222
RP SS+GHG DG +R +S P + APH SP S ESA
Sbjct: 1121 RP-SSSGHGGDGERRRSSEDSGPPPLLQVTAIFAPHASPEELPPSGSESA 1169
>03_06_0422 + 33818887-33819996
Length = 369
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 134 PAT-IRSRRISQFAPLLIALVGLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMA 310
P+T +RS RIS +APLL+ ++G G S+ A RL R + + + + E H
Sbjct: 45 PSTNLRSDRISLWAPLLLGMMG----GSSRRARRLRRQIMEDDDDDDDDEDDEDDSDHEL 100
Query: 311 LYGSHDIFRADNQQGSAIR 367
D+FR + S +R
Sbjct: 101 ----EDLFRRQRRGSSLVR 115
>05_07_0367 -
29700855-29700920,29701092-29701149,29701446-29701503,
29701800-29701857,29702154-29702211,29702508-29702551,
29702840-29703022,29703192-29703249,29703545-29703602,
29703897-29703954,29704250-29704307,29704956-29705013,
29705310-29705367,29705664-29705721,29706348-29706398,
29706695-29706752,29707049-29707106,29707403-29707459,
29707754-29707810,29708085-29708135,29708431-29708507,
29708785-29708842,29709139-29709195,29709490-29709546,
29709821-29709893,29710167-29710224,29710521-29710578,
29710875-29710931,29711558-29711608,29711904-29711980,
29712258-29712315,29712612-29712669,29712966-29713016,
29713667-29713717,29714014-29714057,29714368-29714444,
29714722-29714779,29715076-29715126,29715423-29715480,
29715776-29715833,29716130-29716187,29716484-29716534,
29716831-29716907,29717185-29717242,29717539-29717589,
29718240-29718316,29718594-29718651,29718947-29719004,
29719301-29719351,29719648-29719705,29723277-29723334,
29723631-29723681,29724331-29724388,29724684-29724741,
29725038-29725088,29725385-29725442,29725738-29725814,
29726092-29726148,29726444-29726501,29726798-29726848,
29727070-29727075
Length = 1209
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 226 CQLTLATSWQTNQGYEERRKLTDTTRA 146
C +T ATSW+T+ G + R+ +TT A
Sbjct: 464 CFVTYATSWKTSCGPSDIRRFAETTAA 490
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 73 WRPGSSTGHGNDGGQRETSSTRNDPLASYQSICAAPHSPGWSASSWQESAGTP 231
+ PGSS H G ++R P+A Q AP PG + +E+ P
Sbjct: 307 FHPGSSGSHHGQGQHNRGVASR-PPMAPVQQAAPAPPKPGAGFNCAEEAQAAP 358
>06_03_0725 -
23894215-23894412,23894660-23894803,23895058-23895126,
23895197-23895267,23895357-23895444,23895522-23895707,
23895805-23895903,23896002-23896082,23896575-23896634,
23896656-23896779,23897026-23897120,23897205-23897331,
23897559-23897662,23897883-23897945
Length = 502
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +1
Query: 97 HGNDGGQRETSSTRNDPLASYQSICAAPHSPGWSASSWQESAGTPTCQTSQLEWRKHQSV 276
H + + S +N+ SY S + S G +S S G+ + ++ KH+S+
Sbjct: 382 HTAESHLEDKSHRQNEECCSYTS--SNRESWGRCSSLGAASDGSSLGERPEIPSHKHKSM 439
Query: 277 RLQRVSSPAYGLVRQPRHLPRGQPAR 354
L+ +++P + R+P +P+ + R
Sbjct: 440 TLRALATPLRRIRRKPLAIPKERKNR 465
>11_01_0432 +
3313060-3313107,3313610-3313753,3314510-3314662,
3315283-3315792,3315888-3317423,3317505-3317573,
3317742-3317807,3318517-3318640,3319464-3319690
Length = 958
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = -3
Query: 331 DVVAAVQGHMPATILAAIEHFGAFSIPVEMSGKSVCQ------LTLATSWQTNQGYEERR 170
D +A ++ A L A + GAF + +E+ +++C L A W ++ + R+
Sbjct: 19 DEIADALVYLDAGTLEAFQFIGAFPLLLELGARAICSLENASPLDAAAEWHSSFAHPARK 78
Query: 169 KLTDTTR 149
+ T+R
Sbjct: 79 IVVITSR 85
>04_03_0175 + 12269091-12269561
Length = 156
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 82 GSSTGHGNDGGQRETSSTRNDPLASYQSICAAPHSPGWSAS 204
G + G +GG E+S+ R DPL S P SAS
Sbjct: 82 GGCSARGGEGGGVESSAARGDPLGVVNSDRGESGDPSASAS 122
>11_04_0336 -
16507661-16507753,16508061-16508158,16508311-16508626,
16508699-16508891,16508990-16509030
Length = 246
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 223 GTPTCQTSQLEWRKHQSVRLQRVSSPA 303
G P C+T L WR ++ +R+ SPA
Sbjct: 44 GLPECRTPALTWRDYKRSTNERMMSPA 70
>09_06_0269 -
21947847-21947904,21947988-21948169,21948268-21948963,
21949378-21950021,21950441-21950543,21950618-21950812,
21951308-21951931
Length = 833
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 103 NDGGQRETSSTRNDPLASYQSI 168
NDGG R+TS R DP +S +I
Sbjct: 321 NDGGSRDTSFRRVDPASSVSAI 342
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 47 KTLVQENSNGARDLARATAMMEDKEKLLA 133
K LVQEN + A D+ T ++ED + +LA
Sbjct: 347 KKLVQENISSALDIEYPTQVIEDVKSILA 375
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 170 QID*YDASGSLRVLEVSLCPPSLPWPVLDPGR 75
Q+D +DA G+++VL + P +L +L PGR
Sbjct: 298 QLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
>04_04_0517 + 25841292-25842099,25842256-25842308
Length = 286
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 73 WRPGSSTGHGNDGGQRETSSTRNDPLASYQSICAAP 180
W PG+STG G R S T + P A +S P
Sbjct: 186 WSPGASTGRRPTCGARGWSCTCSSPAARSRSAARRP 221
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 170 QID*YDASGSLRVLEVSLCPPSLPWPVLDPGR 75
Q+D +DA G+++VL + P +L +L PGR
Sbjct: 298 QLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
>10_01_0183 + 2056891-2056947,2059136-2060089
Length = 336
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 235 CQTSQLEWRKHQSVRLQRVSSPAYGLVRQPRHLPRG 342
C+T+ LE+ Q VR+ +SS + R P LPRG
Sbjct: 153 CRTAALEYAAKQRVRVLVMSSARWSWKRDP-PLPRG 187
>08_02_0137 - 13049872-13050893,13051022-13051175
Length = 391
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 133 TRNDPLASYQSICAAP-HSPGWSASSWQESAGTPTCQTSQLEWRKHQSVRLQRVSS 297
T + P+ Y+ ++P W+ + + G+P TS+ W+ Q V+ ++S
Sbjct: 311 TSSTPMQMYEDDWEPTGYAPRWTQAPHHNTGGSPRQNTSENRWQAPQDVQWGNMNS 366
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,909,427
Number of Sequences: 37544
Number of extensions: 336112
Number of successful extensions: 1270
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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