Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0648
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   3.0  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    23   5.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.0  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +1

Query: 124 TSSTRNDPLASYQSICAAPHSPGWSASSWQE--SAGTPTCQT 243
           T ST + P  +  S C  P S  WS  S      A T +C T
Sbjct: 47  TRSTPSSPRLAQASTCPVPCSSIWSRPSSMRCAPARTASCST 88


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 262 KHQSVRLQRVSSPAYGLVRQPRHLP 336
           KH   +   V  PAY + R P H P
Sbjct: 397 KHVIPKRTLVQIPAYAIQRDPDHYP 421


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 397 VLYGLVCALTTNCGPLLVVRAEDVVAAVQGHMPATILAAIE 275
           ++Y  V  +    G  ++  A+D+V  V G  P T  AA E
Sbjct: 714 MMYDGVFGVGLPLGAEIIGYADDLVLLVPGTTPTTAAAAAE 754


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,252
Number of Sequences: 2352
Number of extensions: 12303
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)