Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0647
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       28   0.079
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    24   1.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   3.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 0.079
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -3

Query: 494 VTGVTFRLPLTYSIHSRYSTHPSQHWHLRCMQSPFIRHFSHNIKYIL 354
           +  V   LP T   H    THP+  W+ +C+       ++H I Y L
Sbjct: 162 IGSVVCSLPQTIVFH--LETHPNVTWYSQCVTFNAFPTYTHEITYSL 206


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 354 KNVLNIVTKVADERRLHAAEMPMLRWMCGVTRMDRIC*RKSESD 485
           KN++N +  V   +R+ A+E     W+C   R+  +  R+   D
Sbjct: 144 KNLINQMLTVNPSKRITASEALKHPWICQRERVASVVHRQETVD 187


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 512 ALLSCSVTGVTFRLPLTYSIHSRYSTHPSQHWHL 411
           A++S  +TG+  R+ +  SI          HW L
Sbjct: 412 AIVSGLITGLIMRVLICGSISEEQKFDDEAHWEL 445


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 491 TGVTFRLPLTYSIHSRYSTHPSQH 420
           TG T     T  +H   S HP QH
Sbjct: 179 TGTTTTSTGTRLLHGILSQHPQQH 202


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 49  LHLTTRIVQYRVEE 90
           +HLT  +VQY+ ++
Sbjct: 912 IHLTVAVVQYKTQD 925


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,849
Number of Sequences: 438
Number of extensions: 3512
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)