Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0643
         (671 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    30   1.7  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    30   1.7  
Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF067937-5|AAF99917.2|  422|Caenorhabditis elegans Hypothetical ...    29   4.0  

>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 549 AEEGNVLIVPSCGLASIPSAAGLMFLQNQF 638
           A+E  V +V +CG  SIP+  G+ FL+  F
Sbjct: 131 AKEQGVYVVSACGWDSIPADLGVNFLKKNF 160


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 549 AEEGNVLIVPSCGLASIPSAAGLMFLQNQF 638
           A+E  V +V +CG  SIP+  G+ FL+  F
Sbjct: 131 AKEQGVYVVSACGWDSIPADLGVNFLKKNF 160


>Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical
           protein F22G12.3 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = +3

Query: 561 NVLIVPSCGLASIPSAAGLMFLQNQFK 641
           ++L++PS  +ASI + AG+  ++N+FK
Sbjct: 271 SILLLPSESVASIATNAGMNMIENKFK 297


>AF067937-5|AAF99917.2|  422|Caenorhabditis elegans Hypothetical
           protein F22F7.2 protein.
          Length = 422

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 549 AEEGNVLIVPSCGLASIPSAAGLMFLQNQF 638
           A+  NV IV +CG  SIP+  G+  L+  F
Sbjct: 133 AKNNNVYIVSACGWDSIPADFGVKLLKRYF 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,781,606
Number of Sequences: 27780
Number of extensions: 212711
Number of successful extensions: 386
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)