Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0643
         (671 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39410.1 68418.m04774 expressed protein                             39   0.003
At5g60270.1 68418.m07554 lectin protein kinase family protein co...    27   8.6  
At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki...    27   8.6  

>At5g39410.1 68418.m04774 expressed protein
          Length = 454

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +3

Query: 534 NNHNAAEEGNVLIVPSCGLASIPSAAGLMFLQNQFKVISTDIPDVV 671
           N H+ AEE   LIV +CG  SIP+  GL+F   Q+  +S  +P+ +
Sbjct: 136 NYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQW--VSPSVPNQI 179


>At5g60270.1 68418.m07554 lectin protein kinase family protein
           contains Pfam domains, PF00069: Protein kinase domain,
           PF00139: Legume lectins beta domain, and PF00138: Legume
           lectins alpha domain
          Length = 668

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +3

Query: 495 YQREIPQIFNAFRNNHNAAEEGNVLIVPSCGLASIPSA 608
           +Q+E P ++N F +  +   +G+  I+PS G+  + +A
Sbjct: 20  FQQETPFVYNNFGHVDHLHLDGSARIIPSGGILQLTNA 57


>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 FTWCXGATWIHXENQAVNFLR 193
           FTW  G++WI   N++ N +R
Sbjct: 235 FTWADGSSWIGSWNESSNLMR 255


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,631,984
Number of Sequences: 28952
Number of extensions: 185598
Number of successful extensions: 321
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)