Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0642
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   206   1e-55
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   130   1e-32
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   128   4e-32
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.89 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.3  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  206 bits (503), Expect = 1e-55
 Identities = 83/96 (86%), Positives = 91/96 (94%)
 Frame = -1

Query: 620 FLYWIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWREKCSVEGNPACWVPHSC 441
           FLYW+DEIL +HNDVYFVTMTQVIQW+QNPRT+TE+KNFEPWREKC VEGNP CWVPHSC
Sbjct: 439 FLYWVDEILANHNDVYFVTMTQVIQWIQNPRTITESKNFEPWREKCVVEGNPHCWVPHSC 498

Query: 440 KLTSKEVPGETINLQTCLRCPVNYPWLNDPTGDGHY 333
           KLTSKEVPGETINLQTC+RCP NYPW+NDPTGDG +
Sbjct: 499 KLTSKEVPGETINLQTCVRCPNNYPWVNDPTGDGFF 534


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  130 bits (313), Expect = 1e-32
 Identities = 52/91 (57%), Positives = 71/91 (78%)
 Frame = -1

Query: 611 WIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWREKCSVEGNPACWVPHSCKLT 432
           +I+E+LQ  NDVYFVT  QVIQW+QNP  +   ++F+ W+EKC ++G P C +P+SC LT
Sbjct: 434 FIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALT 492

Query: 431 SKEVPGETINLQTCLRCPVNYPWLNDPTGDG 339
           ++E+PGET+ L TC+ CP NYPW+ DPTGDG
Sbjct: 493 TRELPGETLRLFTCMECPNNYPWILDPTGDG 523


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  128 bits (309), Expect = 4e-32
 Identities = 51/91 (56%), Positives = 71/91 (78%)
 Frame = -1

Query: 611 WIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWREKCSVEGNPACWVPHSCKLT 432
           +I+E+LQ  NDVYFVT  QVIQW+QNP  +   ++F+ W+EKC ++G P C +P+SC LT
Sbjct: 441 FIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALT 499

Query: 431 SKEVPGETINLQTCLRCPVNYPWLNDPTGDG 339
           ++E+PGET+ L TC+ CP NYPW+ +PTGDG
Sbjct: 500 TRELPGETLRLFTCMECPNNYPWILEPTGDG 530


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 517  KPRTSSRGEKSAPSKETLHAGYLIPASS 434
            KP+        +PSK  + AGY +PA S
Sbjct: 2475 KPKNLLLSAAVSPSKAVMDAGYDVPALS 2502



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 517  KPRTSSRGEKSAPSKETLHAGYLIP 443
            KP+        +PSK  + AGY +P
Sbjct: 1552 KPKGYLLSAAVSPSKTVIDAGYDVP 1576


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -3

Query: 408 HQFTNLFEMPSQLPXVKRPH 349
           H++T+  ++  + P +KRP+
Sbjct: 292 HKYTHEIKLHDKTPFLKRPY 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,027
Number of Sequences: 336
Number of extensions: 2897
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)