Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0639
         (389 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P648 Cluster: Chromosome chr4 scaffold_6, whole genom...    32   4.5  
UniRef50_Q1ITD0 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  

>UniRef50_A7P648 Cluster: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence; n=5; Magnoliophyta|Rep: Chromosome
           chr4 scaffold_6, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 517

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 14/67 (20%), Positives = 33/67 (49%)
 Frame = +1

Query: 109 NNFVSMTMYYYNLKKSIAKTLDDYVIMLKYITAKWLYRHSYS*NVFSHLAGENILCDSKA 288
           + ++  T+Y+ +L  ++++ +      +K + A W +  + +      L   N+LC S  
Sbjct: 346 SQYMQQTVYWSSLSSAVSEVVFSKHAKVKILVAYWAHFINNTDQYLKSLLYSNVLCYSSK 405

Query: 289 ESKCSNE 309
            +KCS +
Sbjct: 406 YNKCSGK 412


>UniRef50_Q1ITD0 Cluster: Putative uncharacterized protein; n=1;
           Acidobacteria bacterium Ellin345|Rep: Putative
           uncharacterized protein - Acidobacteria bacterium
           (strain Ellin345)
          Length = 1198

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 21/71 (29%), Positives = 37/71 (52%)
 Frame = +1

Query: 166 TLDDYVIMLKYITAKWLYRHSYS*NVFSHLAGENILCDSKAESKCSNESRFFTILIIYRE 345
           T D+ V+++K   AK L R +YS  V S +  + +L D+K  S     +R + +   +R+
Sbjct: 297 TGDETVVLMKLRFAKDLLRQTYSREVLSGMIDKKMLIDAKTPS----SNRLYVVFHPWRD 352

Query: 346 NASPQLFGSYF 378
           +A  +   S F
Sbjct: 353 DAPDKRDESIF 363


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,536,303
Number of Sequences: 1657284
Number of extensions: 6089597
Number of successful extensions: 11479
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11479
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)