Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0638
(623 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 29 0.72
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 0.95
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 1.7
SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr ... 27 2.2
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 2.2
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.9
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 5.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 5.1
SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr 2|||Ma... 26 5.1
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 5.1
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 25 6.7
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 0.72
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 182 TPGDLESIINQIFTSAKPPTQLQ-PVTQPSVADRAPSTLVPGVSTNDDLSCQTSD 343
TP N F + P + LQ P T S + P ++ PG++ D S +S+
Sbjct: 393 TPVTTSGTFNYSFNATNPQSILQRPATTSSAVPQLPKSVTPGLAYPHDSSMLSSN 447
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.3 bits (60), Expect = 0.95
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 191 DLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGEC 361
D ESI +F S K T++ PV+ + AP P +S +L T+ E +C
Sbjct: 731 DKESIFGSLFGSKKKQTEIPPVSSSPPHNDAPPKAKP-ISAPSELP-NTTSVAEAKC 785
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 360 HSPSWPSEVWHERSSFVETPGTRVDGALSAT 268
HS ++P+E+W R E P + D L+ T
Sbjct: 45 HSLTFPTEIWETRDGLFEEPVGKGDSHLNHT 75
>SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 182 TPGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGEC 361
+P +L++++N+I T P+ S D + S+ VP + ND SC S + G+
Sbjct: 516 SPANLQALLNRIIFIIAKETVTTPLQLTS--DLSISS-VPSIHINDSYSCIISHTKYGKL 572
Query: 362 V 364
V
Sbjct: 573 V 573
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 339 PTAKKGSASTITCAMRPITPLSLTEQTSSI*ESAVARVHRTST 467
P + +T TC+ RP +S TS++ ES + TST
Sbjct: 567 PEETTTTMTTTTCSSRPEETISTVSTTSTVSESGSSSASITST 609
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 480 LPTRDRQQIPSRPGRRP 530
LP+R +PSRPG RP
Sbjct: 114 LPSRGTPSLPSRPGSRP 130
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 279 GLHRPWCL 302
GLHRPWCL
Sbjct: 685 GLHRPWCL 692
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 391 IGRIAQVIVDALPFLAVGGLARKVIVRRDARHQGRWSPI 275
+GR+A+V++D L G A + + R +R G ++P+
Sbjct: 1313 LGRLARVVIDEAHLLLTSG-AWRTALSRASRLSGLYAPL 1350
>SPBC8E4.03 |||agmatinase 2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 5.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -2
Query: 421 DVCSVSDNGVIGRIAQVIVDALPFLAV 341
++ + NG++ RI QV+ D L +L++
Sbjct: 304 EIDEIGVNGIVERIKQVVGDTLVYLSI 330
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 391 IGRIAQVIVDALPFLAVGGLARKVIVRRDARHQGRWSPI 275
+GR+A+V++D L G A + + R +R G ++P+
Sbjct: 1313 LGRLARVVIDEAHLLLTSG-AWRTALSRASRLSGLYAPL 1350
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 618 PNLVSPSTSPVVRKATPSGFR 556
PN +SPST P++ + S FR
Sbjct: 253 PNRLSPSTQPLLSNSRHSSFR 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,386,337
Number of Sequences: 5004
Number of extensions: 44708
Number of successful extensions: 137
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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