Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0638
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068529-1|AAH68529.1| 575|Homo sapiens POLL protein protein. 32 1.9
AY302442-1|AAQ74388.1| 483|Homo sapiens DNA polymerase lamda2 p... 32 1.9
AL627424-13|CAI41038.1| 334|Homo sapiens polymerase (DNA direct... 32 1.9
AL627424-11|CAI41036.1| 269|Homo sapiens polymerase (DNA direct... 32 1.9
AL627424-10|CAI41035.1| 470|Homo sapiens polymerase (DNA direct... 32 1.9
AL627424-8|CAI41032.1| 575|Homo sapiens polymerase (DNA directe... 32 1.9
AL627424-6|CAI41031.1| 515|Homo sapiens polymerase (DNA directe... 32 1.9
AL627424-4|CAI41029.1| 487|Homo sapiens polymerase (DNA directe... 32 1.9
AK022476-1|BAB14050.1| 487|Homo sapiens protein ( Homo sapiens ... 32 1.9
AK021600-1|BAB13852.1| 515|Homo sapiens protein ( Homo sapiens ... 32 1.9
AJ131890-1|CAB65074.1| 575|Homo sapiens DNA polymerase lambda p... 32 1.9
AF525924-1|AAM77696.1| 575|Homo sapiens polymerase (DNA directe... 32 1.9
AF283478-1|AAG22519.1| 575|Homo sapiens DNA polymerase beta2 pr... 32 1.9
AF161019-1|AAF27541.1| 575|Homo sapiens DNA polymerase lambda p... 32 1.9
BC047527-1|AAH47527.1| 824|Homo sapiens mitogen-activated prote... 31 3.3
AF218778-1|AAF32323.1| 797|Homo sapiens islet-brain 2 protein. 31 3.3
AF136382-1|AAF00980.1| 824|Homo sapiens JNK MAP kinase scaffold... 31 3.3
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 31 4.4
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 31 4.4
BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open readi... 31 4.4
BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open readi... 31 4.4
BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open readi... 31 4.4
AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein. 31 4.4
AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein. 31 4.4
AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein. 31 4.4
AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein. 31 4.4
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 31 4.4
AL359878-1|CAI13660.1| 338|Homo sapiens La ribonucleoprotein do... 31 4.4
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 31 4.4
AL157709-3|CAI39595.1| 338|Homo sapiens La ribonucleoprotein do... 31 4.4
AK024253-1|BAB14859.1| 533|Homo sapiens protein. 31 4.4
AF226051-1|AAF86951.1| 855|Homo sapiens HCNP protein. 31 4.4
AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA 62... 31 4.4
AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein. 31 4.4
AC005764-1|AAC62428.1| 420|Homo sapiens R31343_1 protein. 30 5.8
AY376088-1|AAQ87980.1| 125|Homo sapiens immunoglobulin E heavy ... 30 7.6
AY376073-1|AAQ87965.1| 125|Homo sapiens immunoglobulin E heavy ... 30 7.6
AK056290-1|BAB71140.1| 235|Homo sapiens protein ( Homo sapiens ... 30 7.6
>BC068529-1|AAH68529.1| 575|Homo sapiens POLL protein protein.
Length = 575
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AY302442-1|AAQ74388.1| 483|Homo sapiens DNA polymerase lamda2
protein.
Length = 483
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AL627424-13|CAI41038.1| 334|Homo sapiens polymerase (DNA
directed), lambda protein.
Length = 334
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 166 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 214
>AL627424-11|CAI41036.1| 269|Homo sapiens polymerase (DNA
directed), lambda protein.
Length = 269
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AL627424-10|CAI41035.1| 470|Homo sapiens polymerase (DNA
directed), lambda protein.
Length = 470
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AL627424-8|CAI41032.1| 575|Homo sapiens polymerase (DNA directed),
lambda protein.
Length = 575
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AL627424-6|CAI41031.1| 515|Homo sapiens polymerase (DNA directed),
lambda protein.
Length = 515
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AL627424-4|CAI41029.1| 487|Homo sapiens polymerase (DNA directed),
lambda protein.
Length = 487
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 67 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 115
>AK022476-1|BAB14050.1| 487|Homo sapiens protein ( Homo sapiens
cDNA FLJ12414 fis, clone MAMMA1003013, weakly similar to
DNA POLYMERASE BETA (EC 2.7.7.7). ).
Length = 487
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 67 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 115
>AK021600-1|BAB13852.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ11538 fis, clone HEMBA1002746, weakly similar to
DNA POLYMERASE BETA (EC 2.7.7.7). ).
Length = 515
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AJ131890-1|CAB65074.1| 575|Homo sapiens DNA polymerase lambda
protein.
Length = 575
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AF525924-1|AAM77696.1| 575|Homo sapiens polymerase (DNA directed),
lambda protein.
Length = 575
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AF283478-1|AAG22519.1| 575|Homo sapiens DNA polymerase beta2
protein.
Length = 575
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>AF161019-1|AAF27541.1| 575|Homo sapiens DNA polymerase lambda
protein.
Length = 575
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 185 PGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQE 352
PG E+++ + PPT+ PV+ P A AP+T +S DD + SDG+E
Sbjct: 155 PGTHEALLQTALSPPPPPTR--PVSPPQKAKEAPNTQAQPIS--DD---EASDGEE 203
>BC047527-1|AAH47527.1| 824|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 2 protein.
Length = 824
Score = 31.1 bits (67), Expect = 3.3
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +2
Query: 188 GDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVN 367
G + N I ++ P ++ +P +P R P+ L G DD + + G E E
Sbjct: 288 GRSSHLTNSIEEASSPASEPEPPREPP---RRPAFLPVGP---DDTNSEYESGSESEPD- 340
Query: 368 YYLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITP 517
L A++ + +N++ + G CL+P RPP +P++P
Sbjct: 341 --LSEDADSPWLL--SNLVSRMISEGSSPIRCPGQCLSPAPRPPGEPVSP 386
>AF218778-1|AAF32323.1| 797|Homo sapiens islet-brain 2 protein.
Length = 797
Score = 31.1 bits (67), Expect = 3.3
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +2
Query: 188 GDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVN 367
G + N I ++ P ++ +P +P R P+ L G DD + + G E E
Sbjct: 261 GRSSHLTNSIEEASSPASEPEPPREPP---RRPAFLPVGP---DDTNSEYESGSESEPD- 313
Query: 368 YYLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITP 517
L A++ + +N++ + G CL+P RPP +P++P
Sbjct: 314 --LSEDADSPWLL--SNLVSRMISEGSSPIRCPGQCLSPAPRPPGEPVSP 359
>AF136382-1|AAF00980.1| 824|Homo sapiens JNK MAP kinase scaffold
protein JIP2 protein.
Length = 824
Score = 31.1 bits (67), Expect = 3.3
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +2
Query: 188 GDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVN 367
G + N I ++ P ++ +P +P R P+ L G DD + + G E E
Sbjct: 288 GRSSHLTNSIEEASSPASEPEPPREPP---RRPAFLPVGP---DDTNSEYESGSESEPD- 340
Query: 368 YYLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITP 517
L A++ + +N++ + G CL+P RPP +P++P
Sbjct: 341 --LSEDADSPWLL--SNLVSRMISEGSSPIRCPGQCLSPAPRPPGEPVSP 386
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 455 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 553
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 662 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 693
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 455 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 553
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 336 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 368
>AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 336 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 368
>AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 455 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 553
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>AL359878-1|CAI13660.1| 338|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 338
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 455 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 553
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 249 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 280
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 455 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 553
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>AL157709-3|CAI39595.1| 338|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 338
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 455 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 553
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 249 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 280
>AK024253-1|BAB14859.1| 533|Homo sapiens protein.
Length = 533
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 601 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 503
+ + +GP N V VP A V +G++PG I
Sbjct: 303 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 335
>AF226051-1|AAF86951.1| 855|Homo sapiens HCNP protein.
Length = 855
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/89 (30%), Positives = 34/89 (38%)
Frame = +2
Query: 335 TSDGQEGECVNYYLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPIT 514
+S G C + C A +T T GT+V PC+ P QR
Sbjct: 335 SSSSAGGPCSSTASCCAKTHTTCTSGTSV-------SPCTRAAPGRSSTPTQRLCRRWTP 387
Query: 515 PRPETLPMNQGCGWRNPDGVAFRTTGDVD 601
RP+ P CGWR P RTT +D
Sbjct: 388 SRPQASPTL--CGWRLPS--FMRTTDSLD 412
>AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA
628-1308] protein.
Length = 681
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 311 TNDDLSCQTSDGQEGECVNYYLCNAAN-NTIITDGTNVIDIRVGSGPCSSYIDVCCLA-P 484
T+ SCQ+S Q + L N + +T+ + D VG GP V L P
Sbjct: 128 TSSGSSCQSSSSQPERGPSPSLLNTISLDTMPKFAFSSEDEGVGPGPAGPKRPVFILGEP 187
Query: 485 DQRPPTDPITPRPETL 532
D P P+ P+P +L
Sbjct: 188 DPPPAATPVMPKPSSL 203
>AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein.
Length = 1308
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 311 TNDDLSCQTSDGQEGECVNYYLCNAAN-NTIITDGTNVIDIRVGSGPCSSYIDVCCLA-P 484
T+ SCQ+S Q + L N + +T+ + D VG GP V L P
Sbjct: 755 TSSGSSCQSSSSQPERGPSPSLLNTISLDTMPKFAFSSEDEGVGPGPAGPKRPVFILGEP 814
Query: 485 DQRPPTDPITPRPETL 532
D P P+ P+P +L
Sbjct: 815 DPPPAATPVMPKPSSL 830
>AC005764-1|AAC62428.1| 420|Homo sapiens R31343_1 protein.
Length = 420
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 501 QIPSRPGRRPCQ*TRXXXXXXXXXXPSGPRATWTAR 608
Q+PSRPG RP R P GP +T TA+
Sbjct: 23 QLPSRPGHRPPGRPRRCPKASCLPPPVGPSSTQTAK 58
>AY376088-1|AAQ87980.1| 125|Homo sapiens immunoglobulin E heavy
chain variable region protein.
Length = 125
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 176 FCAHADARKPMNRSLYIFGYYSQNITLTISN 84
+CA A +P N + Y F Y+ Q +T+S+
Sbjct: 95 YCARAGPLEPFNWNSYFFDYWGQGTLVTVSS 125
>AY376073-1|AAQ87965.1| 125|Homo sapiens immunoglobulin E heavy
chain variable region protein.
Length = 125
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 176 FCAHADARKPMNRSLYIFGYYSQNITLTISN 84
+CA A +P N + Y F Y+ Q +T+S+
Sbjct: 95 YCARAGPLEPFNWNSYFFDYWGQGTLVTVSS 125
>AK056290-1|BAB71140.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ31728 fis, clone NT2RI2006788. ).
Length = 235
Score = 29.9 bits (64), Expect = 7.6
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Frame = +2
Query: 233 PPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQ---EGECVNYYLCNAANNTII 403
PP Q P T P A L P V L +TS G C + A + +
Sbjct: 11 PPAQQAPQTLPGPPGLAQLPLPPEVPPGSHLCVETSSWTIPWTGACPAVAVEQAGGSCRL 70
Query: 404 T-DGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITPRP 523
+ +GS PCS +C P + P TP P
Sbjct: 71 QLRSQDPSPAGMGSSPCSPAHHLCMQLTATAPSSAPRTPTP 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,765,208
Number of Sequences: 237096
Number of extensions: 1987573
Number of successful extensions: 7137
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 6385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7106
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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