Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0638
(623 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75620.1 68414.m08786 glyoxal oxidase-related contains simila... 32 0.36
At1g19900.1 68414.m02495 glyoxal oxidase-related contains simila... 32 0.36
At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-proly... 30 1.4
At3g09000.1 68416.m01053 proline-rich family protein 30 1.4
At2g37810.1 68415.m04642 CHP-rich zinc finger protein, putative 29 2.5
At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containi... 28 4.4
At3g58600.1 68416.m06531 expressed protein hypothetical protein ... 28 4.4
At3g54320.1 68416.m06003 ovule development protein, putative sim... 28 5.8
At5g19340.1 68418.m02305 expressed protein 27 7.7
>At1g75620.1 68414.m08786 glyoxal oxidase-related contains
similarity to glyoxal oxidase precursor [Phanerochaete
chrysosporium] gi|1050302|gb|AAA87594
Length = 547
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 518 RPETLPMNQGC--GWRNPDGVAFRTTGDVDGETK 613
RP T+ N C G PDG +T GD+DGE K
Sbjct: 107 RPLTVQSNTWCSSGGVTPDGTLLQTGGDLDGERK 140
>At1g19900.1 68414.m02495 glyoxal oxidase-related contains
similarity to glyoxal oxidase precursor [Phanerochaete
chrysosporium] gi|1050302|gb|AAA87594
Length = 548
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 512 TPRPETLPMNQGC--GWRNPDGVAFRTTGDVDGETK 613
T RP T+ N C G PDGV +T GD DGE K
Sbjct: 101 TIRPLTVQSNTWCSSGSVRPDGVLVQTGGDRDGELK 136
>At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to 70 kDa
peptidylprolyl isomerase (Peptidylprolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum
aestivum]; FKBP-type peptidyl-prolyl cis-trans
isomerase,Synechocystis sp., PIR2:S75144; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 229
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 306 SLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEQTSSI 428
SLR R+ P++ S+ST+ A R LS+ TSS+
Sbjct: 26 SLRIFASRSSAPSSSSSSSSTVAAASRRSISLSIIAVTSSV 66
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +3
Query: 270 SLIGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEQTSSI*ESAVAR 449
S+ GL RP S R+ + RP T + S + T RP+T + ++S+ A
Sbjct: 140 SVAGLRRPSSSGSSRSTS---RPATPTRRSTTPTTSTSRPVTTRASNSRSSTPTSRATLT 196
Query: 450 VHR--TSTSAVWLPTRD----RQQIPSRPGRRP 530
R TST+A T R P+R RP
Sbjct: 197 AARATTSTAAPRTTTTSSGSARSATPTRSNPRP 229
>At2g37810.1 68415.m04642 CHP-rich zinc finger protein, putative
Length = 233
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +2
Query: 377 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCL---APDQRPPTDPITPRPETLPMNQG 547
C A+N ++ G ++ R GPC + V C+ AP P + + P N
Sbjct: 131 CGASNTCMVCRGA-ILSWRYKCGPCMLDVHVECVNSSAPAATEPQMDLNTSQDPQPYNDE 189
Query: 548 CG 553
CG
Sbjct: 190 CG 191
>At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 576
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 517 GRDGICWRSLVGSQTADVDVR*TRATADSYID 422
G DG+ WR+L+G+ +A D++ + A I+
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
>At3g58600.1 68416.m06531 expressed protein hypothetical protein
F21M11.17 - Arabidopsis thaliana, EMBL:AC003027
Length = 302
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 194 LESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGE 358
+E+ I I PP L PVT A ++PS+L P +S Q D + E
Sbjct: 220 IETTIPSIILPPPPPGPLSPVT---TAQKSPSSLPPSLSLQRSSEQQDLDTKREE 271
>At3g54320.1 68416.m06003 ovule development protein, putative
similar to ovule development protein aintegumenta
(GI:1209099) [Arabidopsis thaliana]
Length = 427
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 351 KGSASTITCAMRPITPLSLTEQTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRP 518
K +T TC+ P + +S + TSS +S R R + P+ D+ P+ P
Sbjct: 2 KKRLTTSTCSSSPSSSVSSSTTTSSPIQSEAPRPKRAKRAKKSSPSGDKSHNPTSP 57
>At5g19340.1 68418.m02305 expressed protein
Length = 263
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 266 SVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVN 367
++A+ PST P +S + DLS SDG + C+N
Sbjct: 8 TMAEAEPSTTGPRISFSADLSSSDSDG-DFICIN 40
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,131,446
Number of Sequences: 28952
Number of extensions: 259378
Number of successful extensions: 857
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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