Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0635
(533 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 78 5e-15
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 75 5e-14
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 57 1e-08
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 50 2e-06
01_06_0111 + 26552513-26553361 31 0.58
05_01_0266 - 2040555-2040722,2041248-2041349,2041461-2041958,204... 31 0.77
10_06_0167 + 11401984-11402023,11402024-11402293,11402499-114026... 29 3.1
12_01_0964 + 9685989-9686459 28 5.4
12_01_0965 + 9688062-9688532 27 9.5
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 27 9.5
02_05_0973 + 33209385-33209456,33210517-33210721,33210810-332109... 27 9.5
>11_06_0151 - 20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 77.8 bits (183), Expect = 5e-15
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Frame = +2
Query: 53 RIEEIPRDELNLQEDEMLVPCAHFYK-----QVYATFGIPFYARFKHNEPFEAVKDRLQK 217
R EEIP +E NL ++ L+ HF K Q FG PFY + E VK+R+QK
Sbjct: 984 RAEEIPEEEKNLGPNDRLIHVYHFMKDPLQNQQIQNFGDPFYLAIREGETLAEVKERIQK 1043
Query: 218 KLDIPDKEWEKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHI 397
KL +PD+E+ K+ FA ++ RP+Y+ + V S+ + GLEH
Sbjct: 1044 KLQVPDEEFCKWKFAFISMNRPDYLQDSDVV-------SARFQRRDVYGAWEQYLGLEHA 1096
Query: 398 NKTPKRSRVNYLEKAIKI 451
+ PKR+ +K +I
Sbjct: 1097 DTAPKRAYTANQKKLTRI 1114
>07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 74.5 bits (175), Expect = 5e-14
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Frame = +2
Query: 53 RIEEIPRDELNLQEDEMLVPCAHFYKQVY-----ATFGIPFYARFKHNEPFEAVKDRLQK 217
R EE+P +E NL + L+ HF K FG PF+ + +E ++K+R+QK
Sbjct: 1012 RAEEVPEEEKNLGPFDRLIHVYHFTKDTQNQTQVQNFGEPFFMVIREDETLSSIKERIQK 1071
Query: 218 KLDIPDKEWEKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHI 397
KL +PD+++ K+ FA ++ GRP+Y + TV R N + GLEH
Sbjct: 1072 KLKVPDEDFSKWKFAYISLGRPDYFEDSDTV---ASRFQRNMY-----GAWEQYLGLEHP 1123
Query: 398 NKTPKRS-----RVNYLEKAIKIYN 457
+ P+++ + E+ +KIYN
Sbjct: 1124 DTAPRKTHNANQNRHSFERPVKIYN 1148
>01_06_0864 - 32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 56.8 bits (131), Expect = 1e-08
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Frame = +2
Query: 56 IEEIPRDELNLQEDEMLVPCAHFY--KQVYATFGIPFYARFKHNEPFEAVKDRLQKKLDI 229
+EE+P +E N + LV HF KQ +G PF+ + E +K R+QKKL +
Sbjct: 945 VEEVPEEEKNAGVRDRLVHVCHFIIEKQHIDYYGEPFFFLIRDGETLSDIKVRIQKKLLV 1004
Query: 230 PDKEWEKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPW---FGLEHIN 400
D+++ K+ FA + + R G +D LS D PW GLEH +
Sbjct: 1005 SDEQFAKWKFAYIAHNR----LAGEYFQDSDIVLSR----FQKDVYG-PWEQCLGLEHSD 1055
Query: 401 KTPKRS 418
TPKRS
Sbjct: 1056 VTPKRS 1061
>12_02_0381 + 18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 53 RIEEIPRDELNLQEDEMLVPCAHFYK-----QVYATFGIPFYARFKHNEPFEAVKDRLQK 217
R EEIP +E NL + L+ HF K Q FG PF + E + +R+QK
Sbjct: 945 RAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQNFGDPFLLVIREGETAAEILERIQK 1004
Query: 218 KLDIPDKEWEK 250
KL +PD+E+ K
Sbjct: 1005 KLRVPDEEFSK 1015
>01_06_0111 + 26552513-26553361
Length = 282
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 112 VCAFLQASIRDVRNSVLRAFQTQRTVRSCQRSPTEETRHTRQRM 243
+C +L + + D S+ + + R + C RSPT+ TR +R+
Sbjct: 233 LCRYLLSPLPDATTSINGSNDSGRPMSRCSRSPTDRTRPRSRRL 276
>05_01_0266 -
2040555-2040722,2041248-2041349,2041461-2041958,
2042372-2042479,2042559-2042753
Length = 356
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 124 LQASIRDVRNSVLRAFQTQRTVRSCQRSPTEET--RHTRQRMGKVQLCCSDK 273
L A ++DVRN + A Q Q VR Q ET R + + K+Q C +DK
Sbjct: 39 LAAELKDVRNKL--ASQEQLFVRESQTRKFAETKARSMEEEISKLQKCLNDK 88
>10_06_0167 +
11401984-11402023,11402024-11402293,11402499-11402632,
11402737-11403663
Length = 456
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 173 KHNEPFEAVKDRLQKKLDIPDKEW--EKYNFAVVTNGRPNYISEGATVNINDFRLSSN 340
+H F ++ + DIPD EK N +VVT G+ Y + +++ LSSN
Sbjct: 213 RHLSNFTSMSGSINGCGDIPDNNSPSEKDNVSVVTKGKDLYYDDAEILDMVTIDLSSN 270
>12_01_0964 + 9685989-9686459
Length = 156
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 47 LYRIEEIPRDELNLQEDEMLVPCAHFYKQVYATFGIPFY 163
+YR ++ + L LQ+ +ML PC F +Q +T IPF+
Sbjct: 27 VYRQYQL-QPHLMLQQ-QMLSPCGEFVRQQCSTVEIPFF 63
>12_01_0965 + 9688062-9688532
Length = 156
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 44 RLYRIEEIPRDELNLQEDEMLVPCAHFYKQVYATFGIPFY 163
++YR ++ + L LQ+ +ML PC F +Q +T PF+
Sbjct: 26 QVYRQYQL-QPHLMLQQ-QMLSPCGEFVRQQCSTVATPFF 63
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 206 RLQKKLDIPDKEWEKYNF 259
+LQKKL IP KE+ YNF
Sbjct: 94 KLQKKLYIPMKEFPGYNF 111
>02_05_0973 +
33209385-33209456,33210517-33210721,33210810-33210975,
33211268-33211490,33211928-33212004,33212090-33212183,
33212202-33212271,33212350-33212447,33212565-33212692,
33212772-33212900,33213013-33213421,33213984-33214105,
33214224-33214313,33215092-33215304,33215453-33215584,
33216258-33216333,33216403-33216420
Length = 773
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 44 RLYRIEEIPRDELNLQEDEMLVPCAHFYKQVYATFGIPFYARFKHNEPFEAVKDRLQKKL 223
+L+ + + EL L +D + HFY+++ T + + HN+ F A + L KL
Sbjct: 512 QLHVLGSVESPELGL-DDPLAHHLMHFYERMGDTLAVQYSGSAAHNKIFSAKRGHL--KL 568
Query: 224 DIPDKEW 244
I +E+
Sbjct: 569 FIRSQEF 575
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,233,581
Number of Sequences: 37544
Number of extensions: 255676
Number of successful extensions: 741
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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