Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0635
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated ub... 149 8e-36
AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific prot... 148 1e-35
AK001734-1|BAA91868.1| 615|Homo sapiens protein ( Homo sapiens ... 32 1.1
AB028960-1|BAA82989.1| 488|Homo sapiens KIAA1037 protein protein. 32 1.1
BC032523-1|AAH32523.1| 676|Homo sapiens WD and tetratricopeptid... 31 1.9
AL663123-11|CAI14787.1| 676|Homo sapiens WD and tetratricopepti... 31 1.9
AL590640-1|CAH73549.1| 676|Homo sapiens WD and tetratricopeptid... 31 1.9
AK023778-1|BAB14675.1| 355|Homo sapiens protein ( Homo sapiens ... 31 2.6
>Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated
ubiquitin-specific protease (HAUSP) protein.
Length = 1102
Score = 149 bits (360), Expect = 8e-36
Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
Frame = +2
Query: 44 RLYRIEEIPRDELNL-QEDEMLVPCAHFYKQVYATFGIPFYARFKHNEPFEAVKDRLQKK 220
R +RIEEIP D++++ +E+EMLV AHF+K+V+ TFGIPF R E F V R+Q
Sbjct: 968 RTFRIEEIPLDQVDIDKENEMLVTVAHFHKEVFGTFGIPFLLRIHQGEHFREVMKRIQSL 1027
Query: 221 LDIPDKEWEKYNFAVVTNGRPNYISEGA-TVNINDFRLSSNTNLSHPDATARPWFGLEHI 397
LDI +KE+EK+ FA+V GR YI+E VN+ DF N+SHP RPW GL+H
Sbjct: 1028 LDIQEKEFEKFKFAIVMTGRHQYINEDEYEVNLKDFEPQPG-NMSHP----RPWLGLDHF 1082
Query: 398 NKTPKRSRVNYLEKAIKIYN 457
NK PKRSR YLEKAIKI+N
Sbjct: 1083 NKAPKRSRYTYLEKAIKIHN 1102
>AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific protease
7 isoform protein.
Length = 1112
Score = 148 bits (358), Expect = 1e-35
Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
Frame = +2
Query: 44 RLYRIEEIPRDELNL-QEDEMLVPCAHFYKQVYATFGIPFYARFKHNEPFEAVKDRLQKK 220
R +RIEEIP D++++ +E+EMLV AHF+K+V+ TFGIPF R E F V R+Q
Sbjct: 978 RTFRIEEIPLDQVDIDKENEMLVTVAHFHKEVFGTFGIPFLLRIHQGEHFREVMKRIQSL 1037
Query: 221 LDIPDKEWEKYNFAVVTNGRPNYISEGA-TVNINDFRLSSNTNLSHPDATARPWFGLEHI 397
LDI +KE+EK+ FA+V GR YI+E VN+ DF N+SHP RPW GL+H
Sbjct: 1038 LDIQEKEFEKFKFAIVMMGRHQYINEDEYEVNLKDFEPQPG-NMSHP----RPWLGLDHF 1092
Query: 398 NKTPKRSRVNYLEKAIKIYN 457
NK PKRSR YLEKAIKI+N
Sbjct: 1093 NKAPKRSRYTYLEKAIKIHN 1112
>AK001734-1|BAA91868.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ10872 fis, clone NT2RP4001725, weakly similar to
GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT. ).
Length = 615
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 245 EKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHINKTPKRS-R 421
E N + TNG N +S G ++ N FRL + P P+ LE + + +
Sbjct: 317 EVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY--LERVKQQANEAFA 374
Query: 422 VNYLEKAIKIYN*AGRRAP 478
+AI++Y+ A +RAP
Sbjct: 375 CQQWTQAIQLYSKAVQRAP 393
>AB028960-1|BAA82989.1| 488|Homo sapiens KIAA1037 protein protein.
Length = 488
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 245 EKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHINKTPKRS-R 421
E N + TNG N +S G ++ N FRL + P P+ LE + + +
Sbjct: 208 EVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY--LERVKQQANEAFA 265
Query: 422 VNYLEKAIKIYN*AGRRAP 478
+AI++Y+ A +RAP
Sbjct: 266 CQQWTQAIQLYSKAVQRAP 284
>BC032523-1|AAH32523.1| 676|Homo sapiens WD and tetratricopeptide
repeats 1 protein.
Length = 676
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 NFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHINKTPKRS-RVNY 430
N + TNG N +S G ++ N FRL + P P+ LE + + +
Sbjct: 319 NGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY--LERVKQQANEAFACQQ 376
Query: 431 LEKAIKIYN*AGRRAP 478
+AI++Y+ A +RAP
Sbjct: 377 WTQAIQLYSKAVQRAP 392
>AL663123-11|CAI14787.1| 676|Homo sapiens WD and tetratricopeptide
repeats 1 protein.
Length = 676
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 NFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHINKTPKRS-RVNY 430
N + TNG N +S G ++ N FRL + P P+ LE + + +
Sbjct: 319 NGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY--LERVKQQANEAFACQQ 376
Query: 431 LEKAIKIYN*AGRRAP 478
+AI++Y+ A +RAP
Sbjct: 377 WTQAIQLYSKAVQRAP 392
>AL590640-1|CAH73549.1| 676|Homo sapiens WD and tetratricopeptide
repeats 1 protein.
Length = 676
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 NFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHINKTPKRS-RVNY 430
N + TNG N +S G ++ N FRL + P P+ LE + + +
Sbjct: 319 NGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY--LERVKQQANEAFACQQ 376
Query: 431 LEKAIKIYN*AGRRAP 478
+AI++Y+ A +RAP
Sbjct: 377 WTQAIQLYSKAVQRAP 392
>AK023778-1|BAB14675.1| 355|Homo sapiens protein ( Homo sapiens
cDNA FLJ13716 fis, clone PLACE2000411, highly similar to
Homo sapiens epsin 2b mRNA. ).
Length = 355
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 269 TNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHINKTPKRS-RVNYLEKAI 445
TNG N +S G ++ N FRL + P P+ LE + + + +AI
Sbjct: 3 TNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY--LERVKQQANEAFACQQWTQAI 60
Query: 446 KIYN*AGRRAP 478
++Y+ A +RAP
Sbjct: 61 QLYSKAVQRAP 71
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,178,916
Number of Sequences: 237096
Number of extensions: 1314476
Number of successful extensions: 3426
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3419
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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