Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0635
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 68 4e-12
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 67 6e-12
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 29 1.6
AL117203-15|CAD57713.2| 670|Caenorhabditis elegans Hypothetical... 28 4.8
L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical p... 27 6.4
AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical ... 27 6.4
L14429-5|AAA28216.1| 123|Caenorhabditis elegans Ribosomal prote... 27 8.5
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 27 8.5
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 27 8.5
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 27 8.5
AC006603-2|AAF39746.2| 507|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical protein
H19N07.2a protein.
Length = 1133
Score = 68.9 bits (161), Expect = 2e-12
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Frame = +2
Query: 14 TLDQVIISPPRLYRIEEIPRDELNLQEDEMLVPCAHFYKQVYATFGIPFYARFKHNEPFE 193
T+ +++ S R+EE+P DEL++ E L P HF ++ FG+ F + ++NE
Sbjct: 994 TMYKLVSSQALHCRLEEVPIDELDMSPGEFLCPVVHFDREPTKLFGLSFVIKIRNNELMT 1053
Query: 194 AVKDRLQKKL-DIPDKEWEKYNFAVVTNG---RPNYISEGATVNINDFRLSSNTNLSHPD 361
V+DRL++KL D+ D ++ KY FA+++ R + G VN+ D +N P
Sbjct: 1054 EVRDRLRRKLNDVSDADFAKYKFALLSRDKLCRTIEFNNGEKVNLADM---ANQTTGVPQ 1110
Query: 362 ATARPWFGLEHINKTPKRSRVNYLEKAIKIYN 457
+ GL+H K+P + + E AI+I N
Sbjct: 1111 V----YIGLDH--KSPIQ---HSSEAAIRILN 1133
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical protein
H19N07.2b protein.
Length = 1130
Score = 68.1 bits (159), Expect = 4e-12
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Frame = +2
Query: 53 RIEEIPRDELNLQEDEMLVPCAHFYKQVYATFGIPFYARFKHNEPFEAVKDRLQKKL-DI 229
R+EE+P DEL++ E L P HF ++ FG+ F + ++NE V+DRL++KL D+
Sbjct: 1004 RLEEVPIDELDMSPGEFLCPVVHFDREPTKLFGLSFVIKIRNNELMTEVRDRLRRKLNDV 1063
Query: 230 PDKEWEKYNFAVVTNG---RPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHIN 400
D ++ KY FA+++ R + G VN+ D +N P + GL+H
Sbjct: 1064 SDADFAKYKFALLSRDKLCRTIEFNNGEKVNLADM---ANQTTGVPQV----YIGLDH-- 1114
Query: 401 KTPKRSRVNYLEKAIKIYN 457
K+P + + E AI+I N
Sbjct: 1115 KSPIQ---HSSEAAIRILN 1130
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical protein
H19N07.2c protein.
Length = 1135
Score = 67.3 bits (157), Expect = 6e-12
Identities = 43/150 (28%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 14 TLDQVIISPPRLYRIEEIPRDELNLQEDEMLVPCAHFYKQVYATFGIPFYARFKHNEPFE 193
T+ +++ S R+EE+P DEL++ E L P HF ++ FG+ F + ++NE
Sbjct: 994 TMYKLVSSQALHCRLEEVPIDELDMSPGEFLCPVVHFDREPTKLFGLSFVIKIRNNELMT 1053
Query: 194 AVKDRLQKKL-DIPDKEWEKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSH-PDAT 367
V+DRL++KL D+ D ++ KY FA+++ + + T+ N+ + ++++
Sbjct: 1054 EVRDRLRRKLNDVSDADFAKYKFALLSRDK---LQLCRTIEFNNGEKVNLADMANQTTGV 1110
Query: 368 ARPWFGLEHINKTPKRSRVNYLEKAIKIYN 457
+ + GL+H K+P + + E AI+I N
Sbjct: 1111 PQVYIGLDH--KSPIQ---HSSEAAIRILN 1135
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -3
Query: 336 LLSLKSLIFTVAPSLM*LGLPFVTTAKLYFSHSLSGMSS 220
LL ++ ++FTV PSL+ LP VT +YF +L +S
Sbjct: 225 LLRIEGVLFTVIPSLI---LPIVTGTLIYFFKTLKKSTS 260
>AL117203-15|CAD57713.2| 670|Caenorhabditis elegans Hypothetical
protein Y48C3A.5b protein.
Length = 670
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 241 FFVGYVEFLL*AIFDSFERFVVFETRVKRNSERRVYLLVEMRTRNQHL--ILL*IQFVSR 68
F G+VE + ++ + E R + R+ L+ + R +H ILL QF+S
Sbjct: 477 FKTGHVESDVYGSLPQLKKRRLLEARARSTDSRKNSALIWAKQRKKHNLNILLQRQFLST 536
Query: 67 YLLYSVESGRRYDD 26
+ S+ES DD
Sbjct: 537 AAVSSMESNNSTDD 550
>L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical
protein F22B7.1 protein.
Length = 348
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 200 KDRLQKKLDIPDKEWEKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPD 361
+DR K + DK +EK + + + + N + IN+ + S NL H D
Sbjct: 87 EDRETLKAYVKDKTYEKLKYVIDSKVKMNRNEKNVLGRINESLVQSIDNLEHFD 140
>AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical
protein T21G5.2 protein.
Length = 109
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = -2
Query: 301 SFAYVIRSAVCHYSKV-----VLFPFFVGYVEFLL*AIFDSFERFVVFETRVKRNS 149
SF ++I+ + Y + VLF +F+ +++ + + SF RF+ F+T +++ S
Sbjct: 29 SFIFLIQFVIFTYIHIFSYLCVLFNYFL-FIDLSISTVIVSFSRFIKFQTNLRQLS 83
>L14429-5|AAA28216.1| 123|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 35 protein.
Length = 123
Score = 27.1 bits (57), Expect = 8.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 200 KDRLQKKLDIPDKEWEKYNFAVVTNGRPNYISEGATVNINDFRLSSNTN 346
KD LQKKLD E + VT G + +S+ V N RL + N
Sbjct: 14 KDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTVIN 62
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 392 HINKTPKRSRVNYLEKAIKIYN 457
H+NK KR ++N LEK +IYN
Sbjct: 424 HLNKQVKRRKINKLEKE-RIYN 444
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 392 HINKTPKRSRVNYLEKAIKIYN 457
H+NK KR ++N LEK +IYN
Sbjct: 398 HLNKQVKRRKINKLEKE-RIYN 418
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 392 HINKTPKRSRVNYLEKAIKIYN 457
H+NK KR ++N LEK +IYN
Sbjct: 424 HLNKQVKRRKINKLEKE-RIYN 444
>AC006603-2|AAF39746.2| 507|Caenorhabditis elegans Hypothetical
protein B0524.3 protein.
Length = 507
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 8 ELTLDQVIISPPRLYRIEEIPRDELN 85
E+ DQV + L ++++IPRDE N
Sbjct: 20 EIDKDQVKVVAENLNKLDQIPRDEAN 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,211,884
Number of Sequences: 27780
Number of extensions: 221471
Number of successful extensions: 731
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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