Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0631
(536 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 269 8e-73
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 269 8e-73
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 248 2e-66
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 223 7e-59
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 119 2e-27
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 62 2e-10
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.60
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 1.8
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.8
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 2.4
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 2.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 5.6
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 5.6
SB_355| Best HMM Match : zf-UBR1 (HMM E-Value=2e-20) 28 5.6
SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13) 27 7.3
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 27 9.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 269 bits (660), Expect = 8e-73
Identities = 123/152 (80%), Positives = 137/152 (90%)
Frame = +2
Query: 80 RAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 259
+ PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMN
Sbjct: 3 KTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMN 62
Query: 260 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 439
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 440 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
VLTKMKETAEAYLG V +AV+TVPAYF+DSQ
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQ 154
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 269 bits (660), Expect = 8e-73
Identities = 124/152 (81%), Positives = 140/152 (92%)
Frame = +2
Query: 80 RAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 259
+APA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+N
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALN 62
Query: 260 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 439
P NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 440 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
VL KMKETAEAYLG+ V +AVITVPAYFNDSQ
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQ 154
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 248 bits (608), Expect = 2e-66
Identities = 126/177 (71%), Positives = 138/177 (77%), Gaps = 25/177 (14%)
Frame = +2
Query: 80 RAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 259
+APA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMN
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMN 62
Query: 260 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 430
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 431 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQ 179
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +2
Query: 425 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQ 247
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 223 bits (545), Expect = 7e-59
Identities = 107/159 (67%), Positives = 128/159 (80%), Gaps = 1/159 (0%)
Frame = +2
Query: 62 KIQNGERAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAA 238
K Q + +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD A
Sbjct: 694 KEQREKVGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGA 753
Query: 239 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 418
KNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF
Sbjct: 754 KNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFA 813
Query: 419 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+Q
Sbjct: 814 AEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 852
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 119 bits (286), Expect = 2e-27
Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 265
+GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q +NP
Sbjct: 34 IGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPK 93
Query: 266 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMV 442
NTI+DAKR IG+ F + K + F V +D G V KG PEE+ V
Sbjct: 94 NTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYV 153
Query: 443 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
+ K++ AE L TV AV++VPA F+ Q
Sbjct: 154 IKKLRTMAERNLTTTVTKAVMSVPAEFDIKQ 184
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 80.6 bits (190), Expect = 7e-16
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 433
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
+M+ T++K TAE L V + VI+VP+Y+ D Q
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQ 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 247
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Frame = +2
Query: 380 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+Q
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQ 53
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 143 GKVEIIANDQGNRTTPSYVAFTDTERLI 226
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 374 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 535
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAE 120
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 152 EIIANDQGNRTTPSYVAFT-DTERL 223
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 160 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 330
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 260 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 162
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 278 RILCCWGSSPPGSWRH 231
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 278 RILCCWGSSPPGSWRH 231
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 468 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 289
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 288 RLASNIVL 265
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 205 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 345
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 342 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 196
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
>SB_355| Best HMM Match : zf-UBR1 (HMM E-Value=2e-20)
Length = 949
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 43 QVTRLIKNTKWRKSTRSRNRSGYH 114
+V R + TK +KSTRSR S YH
Sbjct: 905 EVERALSATKIKKSTRSRWNSQYH 928
>SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13)
Length = 822
Score = 27.5 bits (58), Expect = 7.3
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 447 VSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMS-ACTVASSNLRPMRRLASNI 271
VST+++T G +L+ T LG+ + T S S T+ S +L PMRR +
Sbjct: 751 VSTVDVTLDGLYILAGT--TTGNLGVLNASTRSYTTLMRSHTSTITSMDLDPMRRHMGTV 808
Query: 270 VLLGFIATWFL 238
G I W L
Sbjct: 809 SADGTIRIWDL 819
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 205 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRH 333
H R +R+ + GG +EP + R T T C+CA R+
Sbjct: 1181 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDAETCFCAKRY 1226
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 236 AKNQVAMNPNNTIFDAKRLIGRKFEDATVQAD 331
AKNQ+ NP N + + L FED+ ++ D
Sbjct: 429 AKNQIGQNPTNHAKNQRYLKSIVFEDSLIRND 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,176,017
Number of Sequences: 59808
Number of extensions: 406445
Number of successful extensions: 1200
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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