Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0628
         (532 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7HN17 Cluster: Glycosyl transferase family 2; n=1; Fer...    36   0.44 
UniRef50_A5L334 Cluster: Recombinase A; n=1; Vibrionales bacteri...    33   4.1  
UniRef50_Q8I285 Cluster: Putative uncharacterized protein PFA027...    33   5.4  

>UniRef50_A7HN17 Cluster: Glycosyl transferase family 2; n=1;
           Fervidobacterium nodosum Rt17-B1|Rep: Glycosyl
           transferase family 2 - Fervidobacterium nodosum Rt17-B1
          Length = 341

 Score = 36.3 bits (80), Expect = 0.44
 Identities = 23/77 (29%), Positives = 41/77 (53%)
 Frame = +3

Query: 222 FVYN*MHLSLVNSVYSLKIVKQKRLVFTPTFHILKANKIII*DFHNYFSTKKSLFKKKIS 401
           F+   MH+SL +S++  +I+ +  + FTP     + N+ I    + Y+S    +F K ++
Sbjct: 156 FLLQTMHISLNSSIFLKEIIDKNFIKFTPGTRYSEDNEFI--SKYLYYSGSGYVFNKAVA 213

Query: 402 QVLK*IRVKSSLLIPHL 452
             L   R+KS+  IP L
Sbjct: 214 NAL--YRIKSTTKIPSL 228


>UniRef50_A5L334 Cluster: Recombinase A; n=1; Vibrionales bacterium
           SWAT-3|Rep: Recombinase A - Vibrionales bacterium SWAT-3
          Length = 418

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +2

Query: 167 ICCFIKYLKRIKINKMYIICI*LNAFVTCKFGIFIENREAKTISFHSHFP 316
           + CF+   + I++NK+   CI      T + G +IE   AKT   H HFP
Sbjct: 119 VICFLTARRSIEVNKLEAGCI-----STTESGHWIEMYVAKTYQVHDHFP 163


>UniRef50_Q8I285 Cluster: Putative uncharacterized protein PFA0275c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFA0275c - Plasmodium falciparum (isolate 3D7)
          Length = 1224

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +3

Query: 231 N*MHLSLVNSVYSLKIVKQKRLVFTPTFHILKANKIII*DFHNYFSTKKSLFKKKISQVL 410
           N +HL  +  V++ K V++   +    FH++  + + I D HN +   K + K KI  + 
Sbjct: 262 NILHLENIEYVWN-KTVREGNKI--KLFHLITCDCLKIKDIHNIYMNNKEISKDKIKIIE 318

Query: 411 K*IRVKSSLLIPHLLYS 461
           + I ++  L I  L+ S
Sbjct: 319 ESIHIERILCISQLVCS 335


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,547,525
Number of Sequences: 1657284
Number of extensions: 6113697
Number of successful extensions: 11342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11338
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)