BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0628 (532 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 2.7 AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 2.7 >U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of presynaptic morphologyprotein 1 protein. Length = 3766 Score = 28.7 bits (61), Expect = 2.7 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +3 Query: 429 SSLLIPHLLYSKSTLCALTSFVD*KNATQFLYSR 530 SSLL+ H K TL +LTSF N +FLY + Sbjct: 1430 SSLLLKHFNCEKETLASLTSF---PNILRFLYDQ 1460 >AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical protein F07B7.12 protein. Length = 1900 Score = 28.7 bits (61), Expect = 2.7 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +3 Query: 429 SSLLIPHLLYSKSTLCALTSFVD*KNATQFLYSR 530 SSLL+ H K TL +LTSF N +FLY + Sbjct: 1390 SSLLLKHFNCEKETLASLTSF---PNILRFLYDQ 1420 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,787,565 Number of Sequences: 27780 Number of extensions: 159109 Number of successful extensions: 317 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 307 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 317 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1049512662 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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