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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0628
         (532 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    29   2.7  
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    29   2.7  

>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 429  SSLLIPHLLYSKSTLCALTSFVD*KNATQFLYSR 530
            SSLL+ H    K TL +LTSF    N  +FLY +
Sbjct: 1430 SSLLLKHFNCEKETLASLTSF---PNILRFLYDQ 1460


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
            protein F07B7.12 protein.
          Length = 1900

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 429  SSLLIPHLLYSKSTLCALTSFVD*KNATQFLYSR 530
            SSLL+ H    K TL +LTSF    N  +FLY +
Sbjct: 1390 SSLLLKHFNCEKETLASLTSF---PNILRFLYDQ 1420


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,787,565
Number of Sequences: 27780
Number of extensions: 159109
Number of successful extensions: 317
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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