Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0626
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    26   0.27 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   0.84 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.8  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 514 QNFGIRFREILYQNHIVVLLFVHGPPGATP 425
           Q  GI F  ++Y  + + LL + G   ATP
Sbjct: 233 QILGILFVGVIYTTYTIFLLLIFGSGSATP 262


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = -1

Query: 308 IAKVGGIPSLLSAQQYEALAGGSENSIILSVLEANRTPRVMNLSLIKCFVS*IC*HCIYK 129
           + K G   S  S    + L+G S+N       ++ R P+V +   IK F    C  C + 
Sbjct: 154 LEKSGLFSSKTSEHSVDELSGKSDNDAEEYDEQSLRVPKVNSHGKIKTFK---CKQCDF- 209

Query: 128 VIFIFLIEW*YSKI 87
           V    L +W +SK+
Sbjct: 210 VAITKLEQWNHSKV 223


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -3

Query: 234 FHYFKRTGSKPDSASNEFKSHKMFRELNLLALYLQGDLYIFN*MVI 97
           F +  +  +  +S S  F  +  F+  ++LAL+    +YIF+  ++
Sbjct: 53  FQFIDKKLNNRNSKSRVFYENVNFQFGSILALFGVVQIYIFSGFIV 98


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory
          receptor candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 91 KFQHSLIILIFQFYFFG 41
          KF +S+ IL+FQ   FG
Sbjct: 10 KFVNSIRILLFQSRIFG 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,343
Number of Sequences: 336
Number of extensions: 3303
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)