Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0624
(523 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41291| Best HMM Match : Piwi (HMM E-Value=0) 63 1e-10
SB_35869| Best HMM Match : Piwi (HMM E-Value=4.6e-12) 54 5e-08
SB_17254| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_9279| Best HMM Match : Piwi (HMM E-Value=0) 47 8e-06
SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 28 4.1
SB_401| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_32090| Best HMM Match : Rcd1 (HMM E-Value=6.2e-08) 27 7.1
SB_16860| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_41291| Best HMM Match : Piwi (HMM E-Value=0)
Length = 598
Score = 63.3 bits (147), Expect = 1e-10
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Frame = +1
Query: 103 EDIVSKLMNTGRQMGMNVTQ-PKMACFNIRINDLHKSMLHALE--KQVNFLVVVVSGRG- 270
E ++ N R GM + P A + R+ ++ L+ K + +VV + RG
Sbjct: 123 EGFARQMGNVCRSEGMRMNPVPCRAEYASRVQEVEGIFGKLLDEFKSLQLIVVALPDRGN 182
Query: 271 RDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIP 450
+D Y+++K++ + +GI TQC++ T PQ NI +K+N KL G N + +R
Sbjct: 183 KDVYNEVKRVGDTVLGIPTQCVQMKQFTMA-KPQVCSNIAMKINGKLGGTNHVIADRLKA 241
Query: 451 QCL--KG-----GAVMIVGADVTHPSP 510
KG V+I GADVTHP+P
Sbjct: 242 TITDDKGKKIFDSPVIIFGADVTHPAP 268
>SB_35869| Best HMM Match : Piwi (HMM E-Value=4.6e-12)
Length = 243
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 313 VGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIPQCLKGGAVMIVGAD 492
+G++TQCI+ T+ +PQT N+ LK+N+KL G+N L P + V+ +GAD
Sbjct: 2 LGVITQCIQGKNVTKP-SPQTLSNLCLKINAKLGGVNNILAPEIRPPVFR-EPVIFLGAD 59
Query: 493 VTHPS 507
VTHP+
Sbjct: 60 VTHPA 64
>SB_17254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 313 VGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIPQCLKGGAVMIVGAD 492
+G++TQCI+ T+ +PQT N+ LK+N+KL G+N L P + V+ +GAD
Sbjct: 2 LGVITQCIQGKNVTKP-SPQTLSNLCLKINAKLGGVNNILAPEIRPPVFR-EPVIFLGAD 59
Query: 493 VTHPS 507
VTHP+
Sbjct: 60 VTHPA 64
>SB_9279| Best HMM Match : Piwi (HMM E-Value=0)
Length = 941
Score = 47.2 bits (107), Expect = 8e-06
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Frame = +1
Query: 16 RGGQLSSETGSSEFMGLHCHRIGSTWMYYEDIVSKLMNTGRQMGMNVTQPKMACFNIRIN 195
RG L S ++ +H +R ++ ++++ MG+N T+P+M N +
Sbjct: 401 RGAPLHSTVNLENWVIVHTNRDSGVATDFQQTLARVCGP---MGINTTKPRMVPLN---D 454
Query: 196 DLHKSMLHALEKQV-----NFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRR 360
D S L AL ++ +V +V +D Y +K++ L+ G+ +Q + T +++
Sbjct: 455 DRTDSYLKALSNEIQADFPQIVVTIVPSNRKDRYDSIKKLCCLEKGVPSQVVVSRTLSKK 514
Query: 361 -MNPQTARNILLKVNSKLMGINQALENRSIPQCLKGGAVMIVGADVTHPS 507
M I +++N KL G A++ IP LK +MIVG D H S
Sbjct: 515 QMLMSVCTKIGIQLNCKLGGEAWAVD---IP--LKN--LMIVGIDTYHDS 557
>SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 37.9 bits (84), Expect = 0.005
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +1
Query: 106 DIVSKLMNTGRQMGMNVTQPKM-ACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYY 282
D V + MG+ V QPKM + R +S+ L QV +VV+ D Y
Sbjct: 194 DFVQTMNKCAPAMGIQVNQPKMNQLRDDRTETYLRSIRENLHPQVQVVVVIFPTSRDDRY 253
Query: 283 HKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIPQCLK 462
+K++ ++ + +Q I T + NP R+++ K+ + IN L +
Sbjct: 254 AAVKKLCCVESPVPSQVIISKTIS---NPTKLRSVVQKI---ALQINVKLGGELWALDIP 307
Query: 463 GGAVMIVGADVTH 501
++M+ G DV H
Sbjct: 308 SRSLMVCGIDVYH 320
>SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1565
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 357 PNEPTNSSEHFTKGEFEAYGNKSGIGESFHSSVLKGWG 470
P P+ S HF EF + ++ GES +S +L WG
Sbjct: 735 PFAPSLPSPHFISKEFFIHSRRAKPGESGYSHMLMQWG 772
>SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -2
Query: 276 IAAPSRNDHDQEIDLFF*SVQHTLVQVIYTDVEASHLWLGHVHAH 142
+ AP+RN+ + F + H + +I +V H + H+H H
Sbjct: 123 VVAPARNNKWHPLVAFVRRIAHDMTDIILYNVNRHHHYQHHLHHH 167
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 321 TDAVYQRRYRHAPNEPTNSSEHFTKGEFEAYGNKSGIGESFHSSV 455
T+ Y + P + +E+FT GEF A G +SG+ S +SV
Sbjct: 181 TNFSYGKGIEAMPALKSPDAEYFTVGEFRALGIQSGLDFSKGASV 225
>SB_401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 304 ELKVGILTQCIKEDTATRRMNPQTARNI 387
+LK G + C+K+D +T+R Q +N+
Sbjct: 210 QLKDGTFSTCLKDDASTKRWLSQLMKNL 237
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 355 RRMNPQTARNILLKVNSKLMGINQALENRSIPQCL 459
RR P R + +S L+ NQ L NR++PQ L
Sbjct: 395 RRPVPTPRRTVHKTTSSPLLDPNQPLRNRTLPQPL 429
>SB_32090| Best HMM Match : Rcd1 (HMM E-Value=6.2e-08)
Length = 119
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 304 ELKVGILTQCIKEDTATRRMNPQTARNI 387
+LK G + C+K+D +T+R Q +N+
Sbjct: 76 QLKDGTFSTCLKDDASTKRWLSQLMKNL 103
>SB_16860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 691
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 172 ACFNIRINDLHKSMLHALEKQVNFLVVVV 258
AC+N+++ DLHK L A E+ + L+ V
Sbjct: 357 ACYNLKVLDLHKCELSASEELYSDLLDTV 385
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 345 YRHAPNEPTNSSEHFTKGEFEAYGNKS 425
YR A +EP NSS+H GE + N+S
Sbjct: 265 YREASDEPENSSDH--PGECNSTSNRS 289
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,882,492
Number of Sequences: 59808
Number of extensions: 421204
Number of successful extensions: 1033
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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