Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0624
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +1

Query: 220 ALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ-CIKEDTATRRMNPQTARNILLK 396
           A+ + +  L+  VS   R++     Q    KV    Q C+K+ T   R   +  +   + 
Sbjct: 551 AMARILYVLLYEVSRSQREFEFISPQYTVDKVATNPQNCLKQTTIEHRKQEEVLKRFRMH 610

Query: 397 VNSKLMGINQALENRSIPQC 456
             + L+G +   E   +P+C
Sbjct: 611 ECNLLIGTSVLEEGIELPKC 630


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 190 INDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELK 312
           +ND+ + ++HA+E   N +VV+V       Y K K +A L+
Sbjct: 753 LNDIKRYLVHAIE---NLIVVIV------IYDKCKDVAILQ 784


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 184 IRINDLHKSMLHALEKQVNFLVVVVSGRG 270
           IRI++L K  LH L+  +  +  +V   G
Sbjct: 385 IRISELEKDYLHTLDGALELVRALVEPAG 413


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 178 FNIRINDLHKSMLHALEKQ-VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKE 342
           F +  N L + + H  +++   FL    +      YH  K++AE  +G  T  + E
Sbjct: 311 FKVARNALKRLIKHTRQRKWKEFLGTANNASFGIVYHTFKKVAEGSIGPRTMTLDE 366


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,960
Number of Sequences: 2352
Number of extensions: 14382
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)