Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0624
(523 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 60 1e-09
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 60 1e-09
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 58 3e-09
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 58 3e-09
AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical ... 49 2e-06
AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi doma... 46 1e-05
AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi doma... 46 1e-05
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 39 0.002
AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical ... 35 0.031
Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical pr... 35 0.041
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 34 0.054
U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical pr... 33 0.12
U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical pr... 28 4.7
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 4.7
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 4.7
U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone... 28 4.7
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 28 4.7
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 28 4.7
U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical ... 27 6.2
AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.7 protein.
Length = 898
Score = 60.9 bits (141), Expect = 5e-10
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = +1
Query: 112 VSKLMNTGRQMGMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDY-YHK 288
V L+N ++GM + C + K + H L +Q N +V+ G+ Y +
Sbjct: 530 VRNLVNVASEIGMPFLEEHRFCRYAEPDQTVKLLEH-LNEQYNLQLVLCIVPGKSVVYGE 588
Query: 289 LKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIPQCLKGG 468
LK+ EL +G+ TQC++ ++ +P T N+ +K+NSKL GIN L S PQ L
Sbjct: 589 LKRKGEL-LGLTTQCVRSQNVSKA-SPHTLSNLCMKINSKLGGINVILS--SPPQSLNSE 644
Query: 469 AVMIVGADVTHPS 507
V+ +G +T S
Sbjct: 645 PVLFIGCHLTRSS 657
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 59.7 bits (138), Expect = 1e-09
Identities = 32/91 (35%), Positives = 53/91 (58%)
Frame = +1
Query: 235 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 414
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 545 IQLIVVVLPGK-TPIYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 602
Query: 415 GINQALENRSIPQCLKGGAVMIVGADVTHPS 507
G+N L P+ + V+ +G D+THP+
Sbjct: 603 GVNSILLPNVRPR-IFNEPVIFLGCDITHPA 632
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 59.7 bits (138), Expect = 1e-09
Identities = 32/91 (35%), Positives = 53/91 (58%)
Frame = +1
Query: 235 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 414
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 564 IQLIVVVLPGK-TPIYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 621
Query: 415 GINQALENRSIPQCLKGGAVMIVGADVTHPS 507
G+N L P+ + V+ +G D+THP+
Sbjct: 622 GVNSILLPNVRPR-IFNEPVIFLGCDITHPA 651
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 656 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIILKLNMKMGGIN 714
Query: 424 QALENRSIP-QCLKGGAVMIVGADVTHPS 507
+ I + L M+VG DVTHP+
Sbjct: 715 SRIVADQITNKYLVDQPTMVVGIDVTHPT 743
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 653 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIILKLNMKMGGIN 711
Query: 424 QALENRSIP-QCLKGGAVMIVGADVTHPS 507
+ I + L M+VG DVTHP+
Sbjct: 712 SRIVADQITNKYLVDQPTMVVGIDVTHPT 740
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 656 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIILKLNMKMGGIN 714
Query: 424 QALENRSIP-QCLKGGAVMIVGADVTHPS 507
+ I + L M+VG DVTHP+
Sbjct: 715 SRIVADQITNKYLVDQPTMVVGIDVTHPT 743
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 653 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIILKLNMKMGGIN 711
Query: 424 QALENRSIP-QCLKGGAVMIVGADVTHPS 507
+ I + L M+VG DVTHP+
Sbjct: 712 SRIVADQITNKYLVDQPTMVVGIDVTHPT 740
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/95 (34%), Positives = 52/95 (54%)
Frame = +1
Query: 235 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 414
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 658 IQLVVVVLPGK-TPVYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 715
Query: 415 GINQALENRSIPQCLKGGAVMIVGADVTHPSPDQS 519
G+N L P+ + V+ G D+THP S
Sbjct: 716 GVNSILLPNVRPR-IFNEPVIFFGCDITHPPAGDS 749
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/95 (34%), Positives = 52/95 (54%)
Frame = +1
Query: 235 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 414
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 658 IQLVVVVLPGK-TPVYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 715
Query: 415 GINQALENRSIPQCLKGGAVMIVGADVTHPSPDQS 519
G+N L P+ + V+ G D+THP S
Sbjct: 716 GVNSILLPNVRPR-IFNEPVIFFGCDITHPPAGDS 749
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 658 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIVLKLNMKMGGIN 716
Query: 424 -QALENRSIPQCLKGGAVMIVGADVTHPS 507
+ + ++ + L M+VG DVTHP+
Sbjct: 717 SRIVADKITNKYLVDQPTMVVGIDVTHPT 745
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 661 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIVLKLNMKMGGIN 719
Query: 424 -QALENRSIPQCLKGGAVMIVGADVTHPS 507
+ + ++ + L M+VG DVTHP+
Sbjct: 720 SRIVADKITNKYLVDQPTMVVGIDVTHPT 748
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 658 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIVLKLNMKMGGIN 716
Query: 424 -QALENRSIPQCLKGGAVMIVGADVTHPS 507
+ + ++ + L M+VG DVTHP+
Sbjct: 717 SRIVADKITNKYLVDQPTMVVGIDVTHPT 745
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGIN 423
++VV+ + D Y +K+ +++ GI++QC+ + R P T NI+LK+N K+ GIN
Sbjct: 661 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVS-RPTPATCANIVLKLNMKMGGIN 719
Query: 424 -QALENRSIPQCLKGGAVMIVGADVTHPS 507
+ + ++ + L M+VG DVTHP+
Sbjct: 720 SRIVADKITNKYLVDQPTMVVGIDVTHPT 748
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/95 (34%), Positives = 52/95 (54%)
Frame = +1
Query: 235 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 414
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 666 IQLVVVVLPGK-TPVYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 723
Query: 415 GINQALENRSIPQCLKGGAVMIVGADVTHPSPDQS 519
G+N L P+ + V+ G D+THP S
Sbjct: 724 GVNSILLPNVRPR-IFNEPVIFFGCDITHPPAGDS 757
>AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical
protein K12B6.1 protein.
Length = 881
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 106 DIVSKLMNTGRQMGMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYH 285
D + L +T RQ+GM V+ P ++ IN + + K N +++ + + YH
Sbjct: 506 DCIQHLTSTMRQLGMEVSNPTVSL----INRGYLRSIFENAKAANRQLIMFITKSMNNYH 561
Query: 286 KLKQIAELKVGILTQCIKEDTATRRMNPQ-TARNILLKVNSKLMGINQALEN 438
+ E + +LTQ I+ +TA + Q T +NI+ K N KL G+N L +
Sbjct: 562 TEIKCLEQEFDLLTQDIRFETAVKLAQQQNTRKNIIYKTNMKLGGLNYELRS 613
>AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical
protein F56A6.1b protein.
Length = 856
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 145 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 324
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 519 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 574
Query: 325 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQAL 432
TQ I+ +TA + PQT NI+ K N KL G+N A+
Sbjct: 575 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAI 611
>AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical
protein F56A6.1a protein.
Length = 887
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 145 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 324
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 519 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 574
Query: 325 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQAL 432
TQ I+ +TA + PQT NI+ K N KL G+N A+
Sbjct: 575 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAI 611
>AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform c protein.
Length = 887
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 145 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 324
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 519 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 574
Query: 325 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQAL 432
TQ I+ +TA + PQT NI+ K N KL G+N A+
Sbjct: 575 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAI 611
>AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform a protein.
Length = 913
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 145 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 324
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 545 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 600
Query: 325 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQAL 432
TQ I+ +TA + PQT NI+ K N KL G+N A+
Sbjct: 601 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAI 637
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical
protein K08H10.7 protein.
Length = 1020
Score = 38.7 bits (86), Expect = 0.002
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Frame = +1
Query: 205 KSMLHAL--EKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRM----- 363
K+M L ++Q + +++S R + Y +K + +G+ Q I +T T+ +
Sbjct: 605 KNMFERLPDKEQKVLMFIIISKRQLNAYGFVKHYCDHTIGVANQHITSETVTKALASLRH 664
Query: 364 ---NPQTARNILLKVNSKLMGINQALENRSIPQCLKG--------GAVMIVGADVTHPS 507
+ + I LK+N+KL GINQ L+ I + M VG DVTHP+
Sbjct: 665 EKGSKRIFYQIALKINAKLGGINQELDWSEIAEISPEEKERRKTMPLTMYVGIDVTHPT 723
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 38.7 bits (86), Expect = 0.002
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Frame = +1
Query: 205 KSMLHAL--EKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRM----- 363
K+M L ++Q + +++S R + Y +K + +G+ Q I +T T+ +
Sbjct: 605 KNMFERLPDKEQKVLMFIIISKRQLNAYGFVKHYCDHTIGVANQHITSETVTKALASLRH 664
Query: 364 ---NPQTARNILLKVNSKLMGINQALENRSIPQCLKG--------GAVMIVGADVTHPS 507
+ + I LK+N+KL GINQ L+ I + M VG DVTHP+
Sbjct: 665 EKGSKRIFYQIALKINAKLGGINQELDWSEIAEISPEEKERRKTMPLTMYVGIDVTHPT 723
>AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical
protein Y49F6A.1 protein.
Length = 966
Score = 35.1 bits (77), Expect = 0.031
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Frame = +1
Query: 106 DIVSKLMNTGRQMGMNVTQP-----KMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRG 270
D KL + R+ G+ + + K+ FN K + L++ +++ ++
Sbjct: 535 DFCMKLCDLCRRSGLEIRRETRDWIKIENFNPTSTIELKEQMKRLQQSNCSIIIGITEEK 594
Query: 271 RDYYHKLKQIAELKVGILTQCIKEDTATRRM--NPQTARNILLKVNSKLMGINQALE 435
+ H + + E VG+ T I TA + N QTA N++ K+N K GIN +E
Sbjct: 595 KPEVHDVLKYFEAAVGLQTMQIHSKTAGFIISGNGQTAGNVIKKLNLKCGGINYIVE 651
>Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical
protein C04F12.1 protein.
Length = 944
Score = 34.7 bits (76), Expect = 0.041
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Frame = +1
Query: 106 DIVSKLMNTGRQMGMNVTQPKMACFNIR--INDLHKSMLHALEKQVNFLVVVVSGRGRDY 279
++ S L + +GM + Q + N I + M QV +V+
Sbjct: 541 ELQSILSKKAKDVGMTIGQIDVEDLNDPDIIGAIENKMTILKTSQVKPIVIYADHTSEGT 600
Query: 280 YHKLKQIAELKVGILTQCIKEDTATRRMNPQ-TARNILLKVNSKLMGINQALENRSIPQC 456
+ LK + E ++TQ + D + +R + TA N+L+K+N K G+N + +
Sbjct: 601 HSTLK-LQERLCEVITQQVALDKSLKRTPGKVTANNLLMKLNLKYGGVNHKVRVDNSISH 659
Query: 457 LKGGA--VMIVGADVTHPS 507
L G +I+ DV H S
Sbjct: 660 LWGDTSNTLIISYDVCHSS 678
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 34.3 bits (75), Expect = 0.054
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Frame = +1
Query: 82 GSTWMYYEDIVSKLMNTGRQMGMNVTQPKMACFN-IRINDLHKSMLHALE----KQVNFL 246
G++ + + +++ N GR + + + +P N I ND + + A++ ++++ L
Sbjct: 339 GNSGLLAQKFIAEARNLGRTLQVQLGEPMCVKINGISPNDYLEGLKAAIKSVDGEEIHML 398
Query: 247 VVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNP----QTARNILLKVNSKLM 414
VV+++ + Y LK+ ++ I QC+ T + + +I+LK+ +++
Sbjct: 399 VVMLADDNKTRYDSLKKYLCVECPIPNQCVNLRTLAGKSKDGGENKNLGSIVLKIVLQMI 458
Query: 415 -GINQALENRSIPQCLKGGAVMIVGADVTHPS 507
AL +IP LK + MIVG D+ H S
Sbjct: 459 CKTGGALWKVNIP--LK--STMIVGYDLYHDS 486
>U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical
protein F20D12.1b protein.
Length = 867
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 337 KEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIPQCLKGGAVMIVGADVTHP 504
K+ RR T NI++K N K G+N + C + ++G DV HP
Sbjct: 555 KKSQGGRRAYDLTLDNIVMKANIKCGGLNYTADIPRDLACWNEVSTFVIGMDVAHP 610
>U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical
protein F20D12.1a protein.
Length = 1030
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 337 KEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIPQCLKGGAVMIVGADVTHP 504
K+ RR T NI++K N K G+N + C + ++G DV HP
Sbjct: 718 KKSQGGRRAYDLTLDNIVMKANIKCGGLNYTADIPRDLACWNEVSTFVIGMDVAHP 773
>Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical
protein F44A6.2 protein.
Length = 534
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 97 YYEDIVSKLMNTGRQMGMNVTQPKMACFNI--RINDLHKSMLHALEKQVNFL 246
+Y+ ++ + M T R G + + M C + R+N+LHK L+ L + ++FL
Sbjct: 431 FYKKVLFQKM-TCRIDGCDTYKQLMKCIHELNRLNELHKQQLNILRENLSFL 481
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 253 VVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 432
V+ R R + +++KQ+ + + Q E R ++ N + ++ S ++GI +
Sbjct: 2121 VIENRERTHRNRIKQLEDQIAILRDQLDGERRRRREYVDRSMVNDIGRLGSNVLGIRNSY 2180
Query: 433 ENRSIPQCLKGGA 471
+ SI + GG+
Sbjct: 2181 GDNSIDAIINGGS 2193
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 253 VVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 432
V+ R R + +++KQ+ + + Q E R ++ N + ++ S ++GI +
Sbjct: 2194 VIENRERTHRNRIKQLEDQIAILRDQLDGERRRRREYVDRSMVNDIGRLGSNVLGIRNSY 2253
Query: 433 ENRSIPQCLKGGA 471
+ SI + GG+
Sbjct: 2254 GDNSIDAIINGGS 2266
>U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone
receptor familymember CNR14 protein.
Length = 534
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 97 YYEDIVSKLMNTGRQMGMNVTQPKMACFNI--RINDLHKSMLHALEKQVNFL 246
+Y+ ++ + M T R G + + M C + R+N+LHK L+ L + ++FL
Sbjct: 431 FYKKVLFQKM-TCRIDGCDTYKQLMKCIHELNRLNELHKQQLNILRENLSFL 481
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 97 YYEDIVSKLMNTGRQMGMNVTQPKMACFNI--RINDLHKSMLHALEKQVNFL 246
+Y+ ++ + M T R G + + M C + R+N+LHK L+ L + ++FL
Sbjct: 428 FYKKVLFQKM-TCRIDGCDTYKQLMKCIHELNRLNELHKQQLNILRENLSFL 478
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 97 YYEDIVSKLMNTGRQMGMNVTQPKMACFNI--RINDLHKSMLHALEKQVNFL 246
+Y+ ++ + M T R G + + M C + R+N+LHK L+ L + ++FL
Sbjct: 431 FYKKVLFQKM-TCRIDGCDTYKQLMKCIHELNRLNELHKQQLNILRENLSFL 481
>U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical
protein T03G11.4 protein.
Length = 584
Score = 27.5 bits (58), Expect = 6.2
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +2
Query: 20 EANCLLKPEALNSWGFI 70
+A+CLL+PEA+ +W ++
Sbjct: 478 DAHCLLRPEAIEAWFYL 494
>AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical
protein F33D4.4 protein.
Length = 360
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 188 RMLKQAIFGWVTFMPICRPVFISF 117
R L IFG++ +P+C P+ ISF
Sbjct: 102 RPLANRIFGFIANLPMCIPMSISF 125
>AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical
protein C18E3.2 protein.
Length = 449
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/76 (22%), Positives = 29/76 (38%)
Frame = +3
Query: 147 HERDPTKDGLLQHPYK*PAQEYAARSRKTGQFPGRGRFWTGPRLLSQAETDCRTQSGYTD 326
H + + +HPY P A + R+ G F G+ GPR+++ + Y D
Sbjct: 2 HSQQRPNPQMNRHPYGTPGS--APQMRRPGGFAGQPPQMHGPRMVAPPAAPLPKKKKYAD 59
Query: 327 AVYQRRYRHAPNEPTN 374
+ R + N
Sbjct: 60 KCIHPKIRELEPDAEN 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,719,565
Number of Sequences: 27780
Number of extensions: 305521
Number of successful extensions: 774
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -