Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0623
(527 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 57 2e-09
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 48 7e-07
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 48 7e-07
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 9e-07
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 44 2e-05
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 37 0.002
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 33 0.020
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 33 0.026
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 31 0.080
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 30 0.25
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.43
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 1.7
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 27 1.7
SPAC22A12.16 |||ATP-citrate synthase subunit 2 |Schizosaccharomy... 26 4.0
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 5.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 7.0
SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-... 25 9.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 9.2
SPCC1223.02 |nmt1|thi3|no message in thiamine Nmt1|Schizosacchar... 25 9.2
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 56.8 bits (131), Expect = 2e-09
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Frame = +1
Query: 220 GKSNAADAVVKEIKDKGGVAVADYNSVVEGEK-LIKT---AIDNFG-RIDILINNAGI-L 381
G++ A E++DK GV Y+ +E +I+T A++ G R+D++I NAGI +
Sbjct: 41 GRNKKALEYAAELRDKHGVQAKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAI 100
Query: 382 RDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSS 525
S E W + ++L GA+ T AA F+KQ G ++ T+S
Sbjct: 101 PHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTAS 148
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 48.4 bits (110), Expect = 7e-07
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +1
Query: 274 VAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGA 453
V D N+ +K ++ AI +FGRID+L+NNAG TE+ I ++ GA
Sbjct: 18 VTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGA 77
Query: 454 FKTTHAAWETFRKQKYGRIVMTSS 525
+ A FR Q G I+ SS
Sbjct: 78 LEVIKAITPIFRSQHNGMIINVSS 101
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 48.4 bits (110), Expect = 7e-07
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +1
Query: 274 VAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGA 453
V D N+ +K ++ AI +FGRID+L+NNAG TE+ I ++ GA
Sbjct: 18 VTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGA 77
Query: 454 FKTTHAAWETFRKQKYGRIVMTSS 525
+ A FR Q G I+ SS
Sbjct: 78 LEVIKAITPIFRSQHNGMIINVSS 101
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 48.0 bits (109), Expect = 9e-07
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 EIKDKGGVAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQ 432
+++D AD + + E I+ I G ID+LINNAG+ D F +++ + WD
Sbjct: 42 KVQDAALALQADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDV 101
Query: 433 AVHLKGAFKTTHAAWETFRKQ-KYGRIVMTSS 525
++ L+G + T KQ K G IV S
Sbjct: 102 SLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGS 133
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +1
Query: 340 FGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMT 519
F IDI++ N GI KS MT +++ V+L G F H A F+KQ +G +V T
Sbjct: 96 FDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVAT 155
Query: 520 SS 525
+S
Sbjct: 156 AS 157
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 36.7 bits (81), Expect = 0.002
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 307 GEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQD---WDLIQAVHLKGAFKTTHAAW 477
G+ I+TAI FG++D +I NAG+L + K+ + D W + ++ +T A
Sbjct: 65 GKASIETAIKKFGKLDSVILNAGVL--EPIAKIADADINEWRKLFDINFFSVVETVKYAI 122
Query: 478 ETFRKQKYGRIVMTSS 525
RK K G IV+ SS
Sbjct: 123 PHLRKTK-GTIVIVSS 137
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 33.5 bits (73), Expect = 0.020
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 286 DYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTT 465
D V E K A FG +DI+INNAG F ++ V+ G T
Sbjct: 55 DVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYIT 114
Query: 466 HAAWETFRKQ-KYGRIVMTSS 525
A R+ K GRI+ SS
Sbjct: 115 KEALNLMRESGKGGRILQISS 135
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 33.1 bits (72), Expect = 0.026
Identities = 16/96 (16%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +1
Query: 250 KEIKDKGGVAVADYNSVVEGEKLIKTAIDN----FGRIDILINNAGILRDKSFTKMTEQD 417
K++ ++ GV V + ++ ++ F I +++ NAG+ +S +
Sbjct: 62 KKLAEETGVQVHTLKIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHE 121
Query: 418 WDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSS 525
++ + ++ ++ + + F+KQ +G ++ T+S
Sbjct: 122 FEKVMNINTNSVYRVAYYMGKIFKKQGFGNLIATAS 157
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 31.5 bits (68), Expect = 0.080
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Frame = +1
Query: 217 AGKSNAADAVVKEIKDKGGVAVADYNSVVEGEKLIKTAIDN----FGRIDILINNAGI-L 381
A + + + + KE++ K V+V V K I I++ F ID+LINNAG+ L
Sbjct: 38 ARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLAL 97
Query: 382 RDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSS 525
+ D + ++ G T A F + G I+ S
Sbjct: 98 GTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGS 145
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 29.9 bits (64), Expect = 0.25
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 316 LIKTAIDNFGRIDILINNAGILR-DKSFTKMTEQDWDLIQAVHLKGAFKTTHAA 474
L+ A+ G ID+L+NN + +S + ++ WDL ++ F T AA
Sbjct: 111 LVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAA 164
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.43
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = -1
Query: 353 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTTLA 174
S+LP S++ S ++T SA++T PLS ++ TTA++A P S+ + + +
Sbjct: 413 SVLPTSSVSSTPLSSANSTTATSASST-PLSSVNSTTATSASSTPLSSVNSTTATSASST 471
Query: 173 P 171
P
Sbjct: 472 P 472
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -1
Query: 353 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTT 180
S+LP + + S ++T SA++TP S+ S TT SA+ P S++ S T T
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSAS-STPLSSVSSANSTTAT 336
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = -1
Query: 353 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAALDFP 219
S+LP S++ S ++T SA++T PL+ ++ TTA++A P
Sbjct: 527 SVLPTSSVSSTPLSSANSTTATSASST-PLTSVNSTTATSASSTP 570
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = -1
Query: 320 ISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTTLAP 171
+S + STT ++T++ PLS ++ TTA++A P S+ + + + P
Sbjct: 327 VSSANSTTA--TSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTP 374
>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 418
Score = 27.1 bits (57), Expect = 1.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -1
Query: 446 FKWTAWIKSQSCSVILVKLLSRRMPALLIRISILPKLSIAVFISFSPSTTEL*SATATPP 267
F+W +W+ SQ S L S + + + P + +F +FS +T L SA P
Sbjct: 317 FEWGSWVSSQDTSKNSSNLASASVDDVSEESQVEP--NTLIFQNFSSPSTSL-SAPKDTP 373
Query: 266 LSLISLTTA 240
+ S+ T+
Sbjct: 374 AVIQSINTS 382
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 27.1 bits (57), Expect = 1.7
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 461 VLKAPFKWTAWIK 423
VLKAPF W+AW++
Sbjct: 200 VLKAPFFWSAWLE 212
>SPAC22A12.16 |||ATP-citrate synthase subunit 2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 4.0
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -1
Query: 341 KLSIAVFISFSPSTT--EL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTT 183
K +A +++ SPS + E + +ATP + L A + FP P+L +P TT
Sbjct: 12 KAVLAYWLNRSPSISKEEYKTVSATPAVQL-------AQIQFPLPTLVIPAESTT 59
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 5.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 317 SFSPSTTEL*SATATPPLSLISLTTASAALDFPA 216
S S S + S+++TP +S I TT+S + D P+
Sbjct: 114 SNSSSLPSIPSSSSTPSISSIPHTTSSVSNDIPS 147
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.0 bits (52), Expect = 7.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -1
Query: 317 SFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTTL 177
++S S L ++ +P IS T +S++ +PS+AL S TTT+
Sbjct: 290 TYSTSGPNLTTSNTSPQ---ISSTISSSSFIVESPSVALSTSSTTTI 333
>SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase
[UDP-forming]|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 235 ADAVVKEIKDKGGVAVADYNSVVEGEKLIKTAIDNFGRIDI 357
A+A+VK ++D + V DY+ +V + L + D F I I
Sbjct: 141 AEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGDKFKDIKI 181
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 281 TATPPLSLISLTTASAALDFPAPSLALPRSLTTTLAP 171
T+TPP+ S SA PAPS +P + AP
Sbjct: 1047 TSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
>SPCC1223.02 |nmt1|thi3|no message in thiamine
Nmt1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 346
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 208 RDGAGKSNAADAVVKEIKDKGGV 276
+D GK A + EIK KGGV
Sbjct: 310 KDPMGKQEAIAEIQDEIKQKGGV 332
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,950,693
Number of Sequences: 5004
Number of extensions: 33964
Number of successful extensions: 125
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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