Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0622
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    24   3.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.3  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   7.0  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 396 LPLEILLMVFNSIAFQNTIFTWVRDHRLHHKY 491
           LP  ILL   N + F  ++  W++ + ++  Y
Sbjct: 79  LPHAILLAKLNKVRFPCSLVQWLKSYLINRTY 110


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +3

Query: 396 LPLEILLMVFNSIAFQNTIFTWVRDHRLHHKY 491
           LP  ILL   + +   + +  W++ + +H  Y
Sbjct: 694 LPHAILLAKLDKLGIPSPLVQWLKSYLIHRTY 725


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 441 QNTIFTWVRDHRLHHKYTDTDADPHNA 521
           Q+T+ T    H+LHH+     A PH+A
Sbjct: 63  QDTVGT--AQHQLHHQGHSPVASPHSA 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,093
Number of Sequences: 2352
Number of extensions: 12423
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)