Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0620
(403 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6) 32 0.15
SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.27
SB_20789| Best HMM Match : GATA (HMM E-Value=7.4) 29 1.9
SB_26636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_41815| Best HMM Match : zf-CXXC (HMM E-Value=3.5e-17) 28 3.3
SB_10192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 27 5.7
SB_23696| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_36407| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 26 10.0
SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 26 10.0
SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 26 10.0
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 26 10.0
SB_6738| Best HMM Match : DUF1328 (HMM E-Value=2.4) 26 10.0
SB_55280| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 26 10.0
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 26 10.0
SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
>SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6)
Length = 206
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 35 DEKLIDLVKPYAHLYD--VKDPSRKNILARETTWQEIAKQISRPVEECRKRW 184
+E L + V+ + LYD +KD KN +E W+++A+Q V+E ++++
Sbjct: 18 EEALAEAVRAFPVLYDKSIKDFKDKN--KKENAWKQVAEQAGCSVDEAKRKF 67
>SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 35 DEKLIDLVKPYAHLYD--VKDPSRKNILARETTWQEIAKQISRPVEECRKRW 184
+E + + V+ + LYD +KD KN +E W+++A+Q V+E ++++
Sbjct: 18 EEAIAEAVRAFPVLYDKSIKDFKDKN--KKENAWKQVAEQAGCSVDEAKRKF 67
>SB_20789| Best HMM Match : GATA (HMM E-Value=7.4)
Length = 471
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 226 TFTXLGITIHRRPXPSLPAFFNWSG 152
TF+ +G TI P++ FFNWSG
Sbjct: 171 TFSNVGTTIDFVFGPAITLFFNWSG 195
>SB_26636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 35 DEKLIDLVKPYAHLYD--VKDPSRKNILARETTWQEIAKQ 148
+E L + V+ + LYD +KD KN +E W+++A+Q
Sbjct: 18 EEALAEAVRAFPVLYDKSIKDFKEKN--KKENAWKQVAEQ 55
>SB_41815| Best HMM Match : zf-CXXC (HMM E-Value=3.5e-17)
Length = 906
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 5 GIRHEGTTEEDEKLIDLVKPYAHLYDVKDPSRKNILARETTWQEIAKQISRPVE 166
G EG+TEE EK +LV +L + + + ++ R TW + K I +E
Sbjct: 345 GKAREGSTEESEKPWELV----YLTERELSGLRELIERLRTWPQAQKNIPESIE 394
>SB_10192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 373
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 385 ITSCSVFGFCSLXLITFFCLXMSSGAIN-PRCHPRKFSF 272
+T+ V F + + C + A+ PRC PRK+SF
Sbjct: 182 LTTGHVVNFAGVQKMCDVCCDWAMNAVECPRCGPRKYSF 220
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 383 NLLFCFWFLFINXDYFLLPXHVFRCYQPKMSSK 285
N + FW L +N DY + + + P M +K
Sbjct: 161 NTMAHFWILALNPDYIVFTLQTVKSFLPSMLAK 193
>SB_23696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 5 GIRHEGTTEEDEKLIDLVKPYAHLYDVKDPSRKNILARE 121
G+R +G E KL+D V + + +KDP R IL +
Sbjct: 215 GVRADGNVERSSKLVDGVMVWTEV--LKDPKRFFILVMD 251
>SB_36407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -3
Query: 185 SISSCILQLVWISVSLFLAMLFPL 114
S+++ + +V+ISV F+A+ FPL
Sbjct: 46 SLAASVFTIVFISVERFIAVFFPL 69
>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
Length = 264
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 22 RELPTEQICSNIENIVEECIKLWPQSKI 49
>SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 22 RELPTEQICSNIENIVEECIKLWPQSKI 49
>SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 22 RELPTEQICSNIENIVEECIKLWPQSKI 49
>SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 346
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 135 RELPTEQICSNIENIVEECIKLWPQSKI 162
>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 836
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 115 RELPTEQICSNIENIVEECIKLWPQSKI 142
>SB_6738| Best HMM Match : DUF1328 (HMM E-Value=2.4)
Length = 391
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 253 WCNXGILXETFTXLGITIHRRPXPSLPAFFNWS-GYLFRYFLPCCFPC 113
W + G T T +G+ + + + F+ +S YL +P C+PC
Sbjct: 244 WISFGFTFVTDTAIGLKVAQFRDKTEFVFWVFSLMYLLMVMIPFCYPC 291
>SB_55280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 200 PPETSSISSCILQLVWISVSLFLAMLFPLLVYSS 99
P T S+ + +++IS+ F+A+LFP YS+
Sbjct: 122 PISTIFGSTSNITILFISIERFVAILFPYFYYSA 155
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 432 RELPTEQICSNIENIVEECIKLWPQSKI 459
>SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 22 RELPTEQICSNIENIVEECIKLWPQSKI 49
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 136 RELPTEQICSNIENIVEECIKLWPQSKI 163
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 RETTWQEIAKQISRPVEECRKRWXRSPV 199
RE ++I I VEEC K W +S +
Sbjct: 408 RELPTEQICSNIENIVEECIKLWPQSKI 435
>SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1489
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 71 HLYDVKDPSRKNILARETTWQEIAKQISRPVEECRKRW 184
H+Y DP+ K A + + +A Q+ + E+ R+++
Sbjct: 1245 HVYHEPDPTPKESAAADALYNAVATQLIKRSEKMREKY 1282
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,814,383
Number of Sequences: 59808
Number of extensions: 190047
Number of successful extensions: 496
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -