Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0619
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   0.46 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   4.3  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.3  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.3  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.3  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   4.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    20   7.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    20   7.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    20   7.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    19   9.9  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 0.46
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 317 YCISLSAQGGRAVCVSDKGTVHVWAR 240
           +   L   GG+  C  D G V VW R
Sbjct: 697 FLTDLKLMGGKWSCDCDLGWVEVWER 722


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 218 RAPPDTRALCALTDDNSAVVICEDGT 141
           RAPP   A+C L D        EDGT
Sbjct: 159 RAPPCDPAVCVLPD----CFCSEDGT 180


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 82  SCRLETTTNSYNDDCCTIKF 23
           +C+++ T   ++D  C +KF
Sbjct: 127 TCKMDITWFPFDDQHCDMKF 146


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 82  SCRLETTTNSYNDDCCTIKF 23
           +C+++ T   ++D  C +KF
Sbjct: 127 TCKMDITWFPFDDQHCDMKF 146


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 82  SCRLETTTNSYNDDCCTIKF 23
           +C+++ T   ++D  C +KF
Sbjct: 127 TCKMDITWFPFDDQHCDMKF 146


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 82  SCRLETTTNSYNDDCCTIKF 23
           +C+++ T   ++D  C +KF
Sbjct: 127 TCKIDITWFPFDDQHCDMKF 146


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 82  SCRLETTTNSYNDDCCTIKF 23
           +C+++ T   ++D  C +KF
Sbjct: 127 TCKMDITWFPFDDQHCDMKF 146


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 148  TAPSTSSRLLRKETVIGPTLNISCRLETTTN 56
            T+P  ++   R+ T   PT   +    TTTN
Sbjct: 1048 TSPWWTTTTTRRTTTTRPTTTSTTTRPTTTN 1078


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 76  RLETTTNSYNDD 41
           RL TTT + NDD
Sbjct: 124 RLSTTTQNKNDD 135


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -2

Query: 88  NISCRLETTTNSYND 44
           +++C L+ T + +ND
Sbjct: 184 SLACELKNTVDDFND 198


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = -1

Query: 287 RAVCVSDKGTVHVWARGTHVAAARAP 210
           +AV       +H W  G H  A   P
Sbjct: 15  QAVAAPANAPMHSWYAGYHQGAQMGP 40


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = -1

Query: 287 RAVCVSDKGTVHVWARGTHVAAARAP 210
           +AV       +H W  G H  A   P
Sbjct: 15  QAVAAPANAPMHSWYAGYHQGAQMGP 40


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 258 RALVRHTHRAPALS 299
           + L+R TH++P+ S
Sbjct: 241 KELIRQTHKSPSHS 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,705
Number of Sequences: 336
Number of extensions: 852
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)