Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0618
         (534 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...   140   4e-34
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...   140   4e-34
AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...   139   1e-33
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...   139   1e-33
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...   128   2e-30
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...   128   2e-30
AL110479-9|CAB60315.3|  583|Caenorhabditis elegans Hypothetical ...    31   0.69 
AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine re...    31   0.69 
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr...    28   3.7  
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.    28   3.7  
AC024882-1|AAF60940.1|  369|Caenorhabditis elegans Hypothetical ...    28   3.7  
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score =  140 bits (340), Expect = 4e-34
 Identities = 62/111 (55%), Positives = 72/111 (64%)
 Frame = +2

Query: 200 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 379
           P K +IV  NV  F+ LH A   GLY     AK  T +F  +L+  G FGITAGAHRLWS
Sbjct: 42  PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101

Query: 380 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATR 532
           H  YK   P+ I LM+ N+IA QN +  W RDHR HHK+TDTDADPHN TR
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTR 152


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score =  140 bits (340), Expect = 4e-34
 Identities = 62/111 (55%), Positives = 72/111 (64%)
 Frame = +2

Query: 200 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 379
           P K +IV  NV  F+ LH A   GLY     AK  T +F  +L+  G FGITAGAHRLWS
Sbjct: 42  PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101

Query: 380 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATR 532
           H  YK   P+ I LM+ N+IA QN +  W RDHR HHK+TDTDADPHN TR
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTR 152


>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score =  139 bits (337), Expect = 1e-33
 Identities = 63/111 (56%), Positives = 73/111 (65%)
 Frame = +2

Query: 200 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 379
           P K +IV  NV  F+ LH+A   GLY     AK  T+VF+  L+    FGITAGAHRLWS
Sbjct: 41  PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100

Query: 380 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATR 532
           H  YK   P+ I LM+ N+IA QN I  W RDHR HHK+TDTDADPHN TR
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTR 151


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score =  139 bits (337), Expect = 1e-33
 Identities = 63/111 (56%), Positives = 73/111 (65%)
 Frame = +2

Query: 200 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 379
           P K +IV  NV  F+ LH+A   GLY     AK  T+VF+  L+    FGITAGAHRLWS
Sbjct: 41  PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100

Query: 380 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATR 532
           H  YK   P+ I LM+ N+IA QN I  W RDHR HHK+TDTDADPHN TR
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTR 151


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score =  128 bits (309), Expect = 2e-30
 Identities = 60/110 (54%), Positives = 70/110 (63%)
 Frame = +2

Query: 203 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 382
           IK +IV  NV  F  LHI  L GLY     AK AT  +  +L  LG+ G+T GAHRLW+H
Sbjct: 34  IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93

Query: 383 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATR 532
             YK  L   + LM+ NSIAFQN I  W RDHR HHK+TDTDADPH+  R
Sbjct: 94  RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNR 143


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score =  128 bits (309), Expect = 2e-30
 Identities = 60/110 (54%), Positives = 70/110 (63%)
 Frame = +2

Query: 203 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 382
           IK +IV  NV  F  LHI  L GLY     AK AT  +  +L  LG+ G+T GAHRLW+H
Sbjct: 34  IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93

Query: 383 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATR 532
             YK  L   + LM+ NSIAFQN I  W RDHR HHK+TDTDADPH+  R
Sbjct: 94  RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNR 143


>AL110479-9|CAB60315.3|  583|Caenorhabditis elegans Hypothetical
           protein Y105C5B.11 protein.
          Length = 583

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 17/69 (24%), Positives = 38/69 (55%)
 Frame = +2

Query: 131 QMKQNTSRDNHVDYEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATS 310
           + K+   +D  +  EKL+AP+ + +  +  +M   R  YLH+   Y    C+++ +++ +
Sbjct: 55  ESKEYKRKDVVLYREKLLAPEVTNLVSREQMMMHPRDQYLHVLSPY----CYSAIEVSHA 110

Query: 311 VFAIVLFFL 337
           VF+I  + +
Sbjct: 111 VFSIFAYIV 119


>AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein21 protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = +3

Query: 243 AIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLV 350
           ++Y+L  + D++S+     W+ +F++LC +  G +V
Sbjct: 182 SVYLLSAFADYVSIIVLSFWIVQFVVLCVAIPGAIV 217


>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
           protein T02C12.1 protein.
          Length = 1017

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 170 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 277
           YE+L +   S +   I V N  R+S  H+ G+  +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390


>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
          Length = 1017

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 170 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 277
           YE+L +   S +   I V N  R+S  H+ G+  +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390


>AC024882-1|AAF60940.1|  369|Caenorhabditis elegans Hypothetical
           protein Y9C9A.17 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = +3

Query: 234 YVLAIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLVLQLELIV 371
           + LA  ++ +Y+  I+ SPQ+   +++LL  +S L  +   LEL+V
Sbjct: 20  FSLATNLIAIYL-VITKSPQKIGSYKYLLCSFSILSMIFALLELLV 64


>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical
           protein C44F1.5 protein.
          Length = 1109

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 212 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 316
           K++V  ++    +HI     G+YLC T+ +LA + F
Sbjct: 5   KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40


>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical
           protein C44F1.5 protein.
          Length = 1109

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 212 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 316
           K++V  ++    +HI     G+YLC T+ +LA + F
Sbjct: 5   KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40


>Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.4 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +2

Query: 269 GLYLCFTSAKLATS-VFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAF 445
           GL    TS  +  S VF   +  L  +        LW++N +     L +++ + NS+  
Sbjct: 18  GLTNALTSITVKVSFVFLATVILLSYYFAVLAIRALWNNNIFSNSTRLILIVCLLNSVVH 77

Query: 446 QNTI 457
           Q+T+
Sbjct: 78  QSTM 81


>Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical
           protein T06G6.2 protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +2

Query: 269 GLYLCFTSAKLA-TSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAF 445
           GL    TS  +  +SV  + +  L  +        LW +N +     L +L+ + NSI  
Sbjct: 18  GLTNALTSITVKMSSVLVVTVILLSYYFARLAIRTLWKNNIFSNSTRLILLVCLLNSIIH 77

Query: 446 QNTI 457
           Q T+
Sbjct: 78  QTTM 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,773,129
Number of Sequences: 27780
Number of extensions: 236049
Number of successful extensions: 602
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)