Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0617
(492 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming] beta-... 166 3e-40
UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific suc... 128 5e-29
UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 127 1e-28
UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta s... 126 4e-28
UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular organisms... 125 6e-28
UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 122 4e-27
UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 112 5e-24
UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb CG106... 111 8e-24
UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1; ... 107 1e-22
UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase be... 105 4e-22
UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 103 3e-21
UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102, w... 100 2e-20
UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, wh... 97 2e-19
UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma j... 95 6e-19
UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit, putat... 95 6e-19
UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;... 94 2e-18
UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase be... 89 7e-17
UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=1... 85 1e-15
UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=8... 84 1e-15
UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=3... 83 4e-15
UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit, p... 81 1e-14
UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1... 80 3e-14
UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=2... 77 3e-13
UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 75 9e-13
UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3... 74 2e-12
UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit f... 71 1e-11
UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 71 1e-11
UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=1... 70 3e-11
UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase (ADP-form... 69 4e-11
UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n... 69 4e-11
UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=2... 69 6e-11
UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=7... 69 6e-11
UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta ... 67 2e-10
UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit; ... 67 2e-10
UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=9... 66 5e-10
UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=1... 66 5e-10
UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chai... 65 7e-10
UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta... 60 3e-08
UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7... 60 3e-08
UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n... 59 5e-08
UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n... 58 8e-08
UniRef50_Q8D2D7 Cluster: SucC protein; n=4; Gammaproteobacteria|... 56 3e-07
UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n... 56 4e-07
UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n... 55 1e-06
UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2... 54 1e-06
UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 54 1e-06
UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6... 54 1e-06
UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=4... 54 1e-06
UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1; Rhodopseudo... 52 5e-06
UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6... 52 5e-06
UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 52 9e-06
UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8... 50 3e-05
UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5... 48 1e-04
UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), bet... 48 1e-04
UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit; ... 48 1e-04
UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine ligase-... 47 2e-04
UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n... 46 5e-04
UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1... 46 6e-04
UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3... 44 0.001
UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n... 44 0.001
UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit; ... 44 0.001
UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1... 43 0.004
UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine ligase-... 42 0.007
UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine ligase-... 42 0.007
UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n... 41 0.017
UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila ... 40 0.023
UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family; ... 40 0.030
UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4; ... 40 0.040
UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1; ... 40 0.040
UniRef50_Q39YX4 Cluster: Succinyl-CoA synthetase beta subunit-li... 39 0.070
UniRef50_Q8ZTH6 Cluster: Putative uncharacterized protein PAE324... 38 0.092
UniRef50_Q9V1X5 Cluster: AcdB acetate--coA ligase (ADP-forming) ... 37 0.21
UniRef50_A2SRS8 Cluster: CoA-binding domain protein; n=4; Methan... 37 0.21
UniRef50_A2BMF5 Cluster: Conserved archaeal protein; n=2; Archae... 37 0.28
UniRef50_Q8R6L7 Cluster: UDP-N-acetylmuramyl tripeptide synthase... 36 0.49
UniRef50_A2EVI4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_Q18I19 Cluster: Probable cationic amino acid transport ... 34 2.0
UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3; Chroococcal... 33 2.6
UniRef50_A0GFR9 Cluster: CoA-binding; n=1; Burkholderia phytofir... 33 2.6
UniRef50_Q9FKD7 Cluster: E3 ubiquitin-protein ligase SINA-like 7... 33 2.6
UniRef50_A5DPX5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4... 33 3.5
UniRef50_A3DNX4 Cluster: ATP-grasp domain protein; n=1; Staphylo... 33 3.5
UniRef50_P77886 Cluster: Carbamoyl-phosphate synthase pyrimidine... 33 3.5
UniRef50_Q6RGR4 Cluster: SLV.6; n=1; Streptomyces lavendulae|Rep... 33 4.6
UniRef50_Q1NU51 Cluster: Cyanophycin synthetase; n=3; delta prot... 33 4.6
UniRef50_Q653A4 Cluster: Basic helix-loop-helix-like; n=4; Oryza... 33 4.6
UniRef50_O80261 Cluster: Orf 498; n=1; Vibrio phage fs2|Rep: Orf... 33 4.6
UniRef50_Q9J541 Cluster: Viral replication protein A28-like; n=4... 33 4.6
UniRef50_A1YJ62 Cluster: DNA helicase; n=8; Nucleopolyhedrovirus... 32 6.0
UniRef50_Q7V433 Cluster: Putative uncharacterized protein precur... 32 6.0
UniRef50_A1W4H9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus ... 32 6.0
UniRef50_Q982N4 Cluster: ABC transporter, permease protein; n=1;... 32 8.0
UniRef50_A1IDG9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
>UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor; n=82; cellular
organisms|Rep: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 463
Score = 166 bits (403), Expect = 3e-40
Identities = 79/121 (65%), Positives = 96/121 (79%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRGKGTF++GLKGGV++V +PE A ++ +M+ + L TKQTG GRICN V+V
Sbjct: 98 KAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLV 157
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
ERK+PRREYY AI MERSF GPV+I SS GGVNIEDVAAE+P+AI EPIDI GI +
Sbjct: 158 CERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKE 217
Query: 487 Q 489
Q
Sbjct: 218 Q 218
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +3
Query: 21 LLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
LL++ G+ VPK VAK+ DEA A +L +KD+V+KAQVL
Sbjct: 63 LLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVL 102
>UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit; n=1; Toxoplasma
gondii|Rep: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit - Toxoplasma gondii
Length = 498
Score = 128 bits (310), Expect = 5e-29
Identities = 62/123 (50%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVM 303
K + LAGGRG G F+ NG +GGV++ +P G +A KML + LVTKQTG G++CN V+
Sbjct: 126 KAQVLAGGRGLGFFRENGYQGGVQVCESPREVGIVAEKMLGKTLVTKQTGKEGKLCNKVL 185
Query: 304 VTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
VTER F R+E YVAI+M+R GP++I S++GG +IED+A P++I PIDI GI++
Sbjct: 186 VTERFFIRKEKYVAILMDRGAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISE 245
Query: 484 DQI 492
++
Sbjct: 246 PRL 248
>UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=55; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 432
Score = 127 bits (307), Expect = 1e-28
Identities = 65/121 (53%), Positives = 79/121 (65%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRGKG F +GLKGGV + P V G +A +M+ L TKQT G N VMV
Sbjct: 83 KAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMV 142
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E RE Y+AI+M+RS NGPV++ S QGGV+IE+VAA NP+ I E IDI GI D
Sbjct: 143 AEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDS 202
Query: 487 Q 489
Q
Sbjct: 203 Q 203
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
++ L+ D+G+ V +F VA T +EA++ A LN K+IVLKAQ+L
Sbjct: 43 YQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQIL 87
>UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta
subunit; n=1; Scophthalmus maximus|Rep: Succinate-CoA
ligase ADP-forming beta subunit - Scophthalmus maximus
(Turbot)
Length = 188
Score = 126 bits (303), Expect = 4e-28
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRGKGTF+ GLKGGV++V +PE A DI+ +M+ + L TKQTG AGRICN V +
Sbjct: 100 KAQVLAGGRGKGTFEGGLKGGVKIVYSPEEARDISSQMIGRKLYTKQTGEAGRICNQVFI 159
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASS 393
ER++PRREYY AI MERSF GPV+I SS
Sbjct: 160 CERRYPRREYYFAITMERSFQGPVLIGSS 188
Score = 38.7 bits (86), Expect = 0.070
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 21 LLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
LL++ GI VP VA + +EA A ++ +KD+V+KAQVL
Sbjct: 65 LLKEAGISVPVGLVASSSEEAYAVAKQIGSKDLVVKAQVL 104
>UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular
organisms|Rep: Suclg2 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 419
Score = 125 bits (301), Expect = 6e-28
Identities = 64/121 (52%), Positives = 78/121 (64%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRGKG F +GLKGGV + P V G++A KML L TKQT G VMV
Sbjct: 70 KAQILAGGRGKGVFNSGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMV 129
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E RE Y AI+M+RS NGPV++ S QGG++IE+VAA P+ I E IDI G+ DD
Sbjct: 130 AEALDISRETYFAILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDD 189
Query: 487 Q 489
Q
Sbjct: 190 Q 190
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
++ L++D G+ V +F VA T EA++ A L K+IVLKAQ+L
Sbjct: 30 YQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQIL 74
>UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=35; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 421
Score = 122 bits (294), Expect = 4e-27
Identities = 62/120 (51%), Positives = 84/120 (70%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRG GTFK+GLKGGV +V E A +IAGKML Q+LVTKQTG G++ + V +
Sbjct: 74 KSQILAGGRGLGTFKSGLKGGVHIVKRDE-AEEIAGKMLGQVLVTKQTGPQGKVVSKVYL 132
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E+ E Y +I+++R GP+IIA +GG +IED+A + PD I PID+ +GITD+
Sbjct: 133 CEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDE 192
>UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor; n=23; Fungi/Metazoa
group|Rep: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 427
Score = 112 bits (269), Expect = 5e-24
Identities = 55/118 (46%), Positives = 77/118 (65%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGKG F G K GV M+ +P+ A D+A +ML L+TKQTG AG+ + V +
Sbjct: 76 KAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYI 135
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGIT 480
+R + E Y++I+M+R P+IIASSQGG+NIE+VA PDAI I+ G++
Sbjct: 136 VKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLS 193
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 21 LLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
LLR++GI P+ A T +EA + A +LNT +V+KAQ L
Sbjct: 41 LLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQAL 80
>UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb
CG10622-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to Sucb CG10622-PA, isoform A - Apis
mellifera
Length = 370
Score = 111 bits (267), Expect = 8e-24
Identities = 55/120 (45%), Positives = 73/120 (60%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRGKG F NG KGGV + + D+ ML L TKQT G + +M+
Sbjct: 74 KAQVLAGGRGKGWFDNGFKGGVHLTKDRKAVIDVVKNMLGHRLFTKQTSEDGILVQKIMI 133
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E RE Y+ I+M+R +NGPV+IAS GG++IE VA +NP+ I P+DI GI D+
Sbjct: 134 AESVNIARETYICILMDRQYNGPVLIASPAGGMDIETVAEKNPELIKTIPLDIYYGIDDE 193
>UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1;
Ostreococcus tauri|Rep: Succinyl-CoA-ligase beta subunit
- Ostreococcus tauri
Length = 203
Score = 107 bits (258), Expect = 1e-22
Identities = 58/121 (47%), Positives = 79/121 (65%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRG GTF +G GGV +V E A A KML LVTKQ+G AG+ N++ V
Sbjct: 69 KSQILAGGRGLGTFASGFAGGVHVVAKTE-ARATAEKMLGGTLVTKQSGPAGKPVNVLYV 127
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E+ RE Y A+M++R+ GP++IAS++GG +IED+AA P+ I +DIV G+T
Sbjct: 128 AEKLKLTREMYFALMLDRASAGPLVIASAEGGTSIEDLAATQPEKIIKMRLDIVKGMTRP 187
Query: 487 Q 489
Q
Sbjct: 188 Q 188
>UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=9; Plasmodium|Rep: ATP-specific
succinyl-CoA synthetase beta subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 462
Score = 105 bits (253), Expect = 4e-22
Identities = 53/122 (43%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVM 303
K + L+GGRG G FK N +GGV + +IA KML L+TKQ+G G+ CN V
Sbjct: 99 KAQVLSGGRGVGYFKENNFEGGVHVCRNSMEVKEIATKMLNNTLITKQSGPEGKKCNTVF 158
Query: 304 VTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
+ ER + R+E Y+A +++R+ +G +++ SS GG +IED+ +NPDAI IDI +G+T
Sbjct: 159 ICERFYIRKERYIAFLLDRNSDGIILLGSSIGGSSIEDIIKKNPDAIYKLNIDINNGLTT 218
Query: 484 DQ 489
Q
Sbjct: 219 GQ 220
Score = 34.3 bits (75), Expect = 1.5
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +3
Query: 21 LLRDHGIPVPKFNVAKTXDEAIKFATELNT----KDIVLKAQVL 140
LLR H +P P+ AKT +EA + A L D+V+KAQVL
Sbjct: 60 LLRSHNVPCPEGYAAKTAEEAEEKALLLQNVCGDNDLVIKAQVL 103
>UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor; n=7; Trichomonas
vaginalis|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor - Trichomonas
vaginalis
Length = 407
Score = 103 bits (246), Expect = 3e-21
Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Frame = +1
Query: 127 KHRFLAGGRGKGTF-KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVM 303
K + GGRGKG + + G K GV V + + A IA +ML LVTKQTG G +C VM
Sbjct: 55 KAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVM 114
Query: 304 VTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
+++ +RE Y AI+++R PV+IAS++GGV IE+VAA +P+ I +D V GIT+
Sbjct: 115 LSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITE 174
Query: 484 D 486
+
Sbjct: 175 E 175
>UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=5;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_102, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 449
Score = 100 bits (239), Expect = 2e-20
Identities = 52/119 (43%), Positives = 74/119 (62%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGKGT +GLKGGV++ TPE + +M+ LVT QT G N V+V
Sbjct: 89 KSQVHAGGRGKGTLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLV 148
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
E R+ Y+A +++R+ P I+AS GG+ IE+VA +P++I PIDI +G+TD
Sbjct: 149 HEGVDIVRQLYLAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDINTGLTD 207
>UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_53, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 429
Score = 97.1 bits (231), Expect = 2e-19
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Frame = +1
Query: 145 GGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
GGRGKG FK NG G+ +V+ PE + A KML L+TKQTG+ G+ C MV V ER F
Sbjct: 71 GGRGKGYFKENGFNSGIHIVSNPEDVKEYASKMLGNTLITKQTGSLGKKCEMVYVVERNF 130
Query: 322 PRREYYVAIMMERSFNGPVIIASSQGGVNIED 417
R+E Y++I+++R+ G I+AS +GG++IE+
Sbjct: 131 LRKELYLSILLDRNTGGLGIVASEKGGIHIEE 162
>UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05557 protein - Schistosoma
japonicum (Blood fluke)
Length = 177
Score = 95.5 bits (227), Expect = 6e-19
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +1
Query: 238 MLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIED 417
ML + T QTG +G++CN ++ ERK+ RRE+Y+AI+++RS GPV++ QGGVNIED
Sbjct: 1 MLGHRIFTAQTGDSGQLCNTLLACERKYSRREHYLAIVLDRSSGGPVMVGCKQGGVNIED 60
Query: 418 VAAENPDAITYEPIDIVSGI 477
+A +NPDA+ PIDI G+
Sbjct: 61 IARDNPDALIKIPIDIDKGL 80
>UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit,
putative; n=1; Babesia bovis|Rep: Succinly CoA-ligase
beta subunit, putative - Babesia bovis
Length = 436
Score = 95.5 bits (227), Expect = 6e-19
Identities = 48/118 (40%), Positives = 73/118 (61%)
Frame = +1
Query: 139 LAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERK 318
L GGRGKG F GV + +PE A +A M+ +LVTKQTGA+G C V+V E+
Sbjct: 92 LTGGRGKGKFVGTDISGVELAKSPERAKTLAEGMIGNVLVTKQTGASGLKCKEVLVAEKL 151
Query: 319 FPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQI 492
+E Y++ M++RS + IA+ GG N+E+V+ ++P A+ I+ + GITDD++
Sbjct: 152 NLAKERYISFMLDRSSCSIMAIATKHGGGNVEEVSEKDPSAVLTVKINPLKGITDDEV 209
Score = 33.1 bits (72), Expect = 3.5
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +3
Query: 12 GYTLLRDHGIPVPKFNVAKTXDEAIKFATEL--NTK--DIVLKAQVL 140
G +L++HGIP P +A++ EA E+ +TK ++VLKA VL
Sbjct: 46 GMRILKEHGIPTPMNRLARSPSEAEAMTHEILESTKCGEVVLKALVL 92
>UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;
n=1; Theileria annulata|Rep: Succinyl-coA ligase,
subunit, putative - Theileria annulata
Length = 433
Score = 93.9 bits (223), Expect = 2e-18
Identities = 45/116 (38%), Positives = 70/116 (60%)
Frame = +1
Query: 139 LAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERK 318
L GGRGKG F N GV +VN+PE A + A ML L TKQT G +C+ V++ ++
Sbjct: 89 LTGGRGKGVFSNTGFKGVEVVNSPESASECAKGMLGNYLTTKQTVGKGLLCSQVLLAQKL 148
Query: 319 FPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
+ E Y++ ++R G V IA+ GG N+E++A E PD++ + ++G+TD+
Sbjct: 149 SLKNERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHEYPDSVLTLSVSPLTGLTDE 204
>UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=1; Theileria parva|Rep:
ATP-specific succinyl-CoA synthetase beta subunit,
putative - Theileria parva
Length = 453
Score = 88.6 bits (210), Expect = 7e-17
Identities = 45/116 (38%), Positives = 67/116 (57%)
Frame = +1
Query: 139 LAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERK 318
L GGRGKGTF G KG V +V +P A ML L TKQT G +C V+V ++
Sbjct: 83 LTGGRGKGTFNTGFKG-VEIVKSPSEVSACARGMLGNYLTTKQTVGKGLLCTEVLVAQKL 141
Query: 319 FPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
+ E Y++ ++R G V IA+ GG N+E++A ++PDA+ I ++G+T +
Sbjct: 142 SIKSERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHQHPDAVLTLQISPLTGLTPE 197
>UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=155;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 399
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKN---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNM 297
K + AGGRGKG F+ KGGVR+V + E A +ML ++LVT QTG G+ N
Sbjct: 46 KSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNR 105
Query: 298 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
+ + E +E+Y++++++R+ + ++AS++GG++IEDVA P+ I ID +G+
Sbjct: 106 LYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGV 165
Score = 31.9 bits (69), Expect = 8.0
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQV 137
H+ +L + G PVP+ A T DEA A +L V+K+Q+
Sbjct: 6 HQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQI 49
>UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=80;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhizobium loti (Mesorhizobium loti)
Length = 397
Score = 84.2 bits (199), Expect = 1e-15
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKN---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNM 297
K + AGGRGKG FK KGGVR+ + A +ML LVTKQTG AG+ N
Sbjct: 46 KSQIHAGGRGKGKFKELSPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQVNR 105
Query: 298 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
+ + + RE Y++I+++RS + S++GG++IE VA + P+ + ID G+
Sbjct: 106 LYIEDGADIERELYLSILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKVITVAIDPERGV 165
Query: 478 TDDQI 492
T D +
Sbjct: 166 TADDV 170
>UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=34;
cellular organisms|Rep: Succinyl-CoA synthetase beta
chain - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 398
Score = 82.6 bits (195), Expect = 4e-15
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKN---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNM 297
K + AGGRGKG FK KGGVR+ + + A ML LVTKQTG AG+ N
Sbjct: 46 KSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNR 105
Query: 298 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
+ + + RE Y++I+++RS + S++GG++IE VA P+ I ID G+
Sbjct: 106 LYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGV 165
Query: 478 TDDQI 492
T + +
Sbjct: 166 TAENL 170
>UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit,
putative; n=5; Trichocomaceae|Rep: Succinyl-CoA
synthetase beta subunit, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 407
Score = 81.4 bits (192), Expect = 1e-14
Identities = 44/105 (41%), Positives = 61/105 (58%)
Frame = +1
Query: 100 NSIPKTSF*KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAA 279
+SI S K + LAGGRGKG + KGG+R+V TPE A A +ML L T+QT
Sbjct: 53 SSIGAPSVLKSQILAGGRGKGKMSSDGKGGIRIVATPEQAFQNASRMLGHYLATQQTPPH 112
Query: 280 GRICNMVMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIE 414
G + + + + +E+Y+A+ +R PVI+ S QGGVNIE
Sbjct: 113 GLLVKKLYIYKAVDVEQEFYLALTFDRERYSPVILISDQGGVNIE 157
>UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 398
Score = 79.8 bits (188), Expect = 3e-14
Identities = 49/121 (40%), Positives = 64/121 (52%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGK GG+R NT E AG A +L LVT QTG AG N +++
Sbjct: 55 KSQIKAGGRGKA-------GGIRTANTLEEAGLQAIDLLGSRLVTAQTGPAGEQVNSLLL 107
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
ER RE YV I+++R P ++ S +GGV+IE + E P I E ID G+
Sbjct: 108 EERIDHERELYVGILVDRETGRPALLVSGEGGVDIEKLGREAPGQILCESIDPAYGLRSF 167
Query: 487 Q 489
Q
Sbjct: 168 Q 168
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 27 RDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQV 137
R GIP P+ KT DE + A L +VLK+Q+
Sbjct: 22 RSFGIPTPRGAAGKTSDEIVTAARSLGVMPVVLKSQI 58
>UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=29;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 397
Score = 76.6 bits (180), Expect = 3e-13
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKN---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNM 297
K + AGGRGKG FK KGGVR+ + E + ML LVT QTG AG+ N
Sbjct: 46 KSQIHAGGRGKGKFKELGPDAKGGVRLAKSIEEVVSHSRDMLGNTLVTAQTGDAGKQVNR 105
Query: 298 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
+ + + RE Y +++++RS + S++GG++IE VA + P+ I I+ G+
Sbjct: 106 LYIEDGADIARELYCSLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKIHTIAINPEKGV 165
Query: 478 TDDQI 492
+D +
Sbjct: 166 SDADV 170
>UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=2; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter propionicus (strain DSM 2379)
Length = 394
Score = 74.9 bits (176), Expect = 9e-13
Identities = 46/121 (38%), Positives = 67/121 (55%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGKG GG+R+ P AG+IA ++L LVT QTG G ++V
Sbjct: 45 KAQVYAGGRGKG-------GGIRVAQDPGQAGEIAKELLGTKLVTPQTGPEGLEVRRLLV 97
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E RE Y++I ++R + +IAS++GG++IE++A PD I ID G+
Sbjct: 98 EEVVDIERELYLSITLDRESSRYCLIASAEGGMDIEEIARTAPDRIRILTIDPFIGLRSY 157
Query: 487 Q 489
Q
Sbjct: 158 Q 158
>UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhodopirellula baltica
Length = 394
Score = 74.1 bits (174), Expect = 2e-12
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +1
Query: 127 KHRFLAGGRGKGT-FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVM 303
K + AGGRGKG N + GV +V + E A A +L + LVT QTG G+ + V
Sbjct: 46 KAQIHAGGRGKGNVIDNPDQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVF 105
Query: 304 VTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
V RE Y+ I+++R+ + PV++ S++GGV IE VA E P+ I E D G+
Sbjct: 106 VEAGCDIARELYLGIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDG 165
Query: 484 DQI 492
Q+
Sbjct: 166 FQV 168
>UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit
family protein; n=2; cellular organisms|Rep:
Succinyl-CoA synthetase, beta subunit family protein -
Tetrahymena thermophila SB210
Length = 534
Score = 70.9 bits (166), Expect = 1e-11
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVM 303
K + AGGRGKG FK NG++ GV+ +P+ DIA KML + L+TKQTG GR N V+
Sbjct: 137 KAQIHAGGRGKGFFKENGMQSGVQFATSPQEVKDIAEKMLGKTLITKQTGLRGRSVNSVL 196
Query: 304 VTERKFPRR 330
V ER F R+
Sbjct: 197 VVERTFLRK 205
>UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=64;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 388
Score = 70.9 bits (166), Expect = 1e-11
Identities = 41/119 (34%), Positives = 67/119 (56%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGKG GGV++ + + A +L LVT QTG G+ N +++
Sbjct: 46 KAQIHAGGRGKG-------GGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLI 98
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
E ++E YV+++++R ++ASS+GG++IE+VAA P+ I +D G+ D
Sbjct: 99 EEGADIKKELYVSLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQIGLQD 157
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQV 137
++G +LR + +PVP+ A + +EA+K A L V+KAQ+
Sbjct: 6 YQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQI 49
>UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=14;
Campylobacter|Rep: Succinyl-CoA synthetase beta chain -
Campylobacter jejuni
Length = 387
Score = 69.7 bits (163), Expect = 3e-11
Identities = 43/112 (38%), Positives = 60/112 (53%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRG G GGV++ + D A K+L LVT QTG G++ + +
Sbjct: 46 KAQIHAGGRGLG-------GGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYI 98
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPID 462
+EYY+AI+ R IIASS+GG++IE VA E+P+ I ID
Sbjct: 99 ESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGID 150
>UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase
(ADP-forming) beta chain; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: Probable succinate-CoA ligase
(ADP-forming) beta chain - Protochlamydia amoebophila
(strain UWE25)
Length = 389
Score = 69.3 bits (162), Expect = 4e-11
Identities = 35/108 (32%), Positives = 62/108 (57%)
Frame = +1
Query: 142 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
AGGRGK GGV++ P+ + + +++ + ++ +QTG +G I + V+++
Sbjct: 51 AGGRGKA-------GGVKLATNPQEILEFSQELIGKKIINEQTGPSGMISHQVLISPAIL 103
Query: 322 PRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDI 465
++E+Y+ I + R V+IAS GGVNIE +A E P+ + PI +
Sbjct: 104 IKKEFYLGITINRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPIPL 151
Score = 31.9 bits (69), Expect = 8.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 21 LLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQV 137
+LR +GIPVP F +A + E + + + ++K QV
Sbjct: 11 ILRKYGIPVPDFYIASSSKEVEEIIKQYQLQSAIIKVQV 49
>UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n=3;
Archaeoglobus fulgidus|Rep: Succinyl-CoA synthetase beta
chain 1 - Archaeoglobus fulgidus
Length = 382
Score = 69.3 bits (162), Expect = 4e-11
Identities = 42/122 (34%), Positives = 68/122 (55%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGK GGV+ N+PE A ++A K+L + G V+V
Sbjct: 45 KAQILVGGRGKA-------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLV 90
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E+ R+EYYV ++++S P +I S GG+++E++AA++PDAI D + G+ D
Sbjct: 91 EEQLNMRKEYYVGYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDY 150
Query: 487 QI 492
++
Sbjct: 151 EV 152
Score = 35.9 bits (79), Expect = 0.49
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
H+ + HGI VP+ VA + +EA K A +L + +V+KAQ+L
Sbjct: 6 HQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGR-VVVKAQIL 49
>UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=21;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 388
Score = 68.9 bits (161), Expect = 6e-11
Identities = 41/121 (33%), Positives = 67/121 (55%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGK GGV++ + A ++L + LVT QTG G+ + +
Sbjct: 46 KAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYI 98
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
+ ++EYYV +++R+ + ++AS +GG IE+VAA+ P+ I E ID V G++
Sbjct: 99 EQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPY 158
Query: 487 Q 489
Q
Sbjct: 159 Q 159
Score = 39.1 bits (87), Expect = 0.053
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQV 137
++G + R G+ VP+ VA T +EA++ A EL+T+ V+KAQ+
Sbjct: 6 YQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDTEIYVVKAQI 49
>UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=76;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Bacillus subtilis
Length = 385
Score = 68.9 bits (161), Expect = 6e-11
Identities = 38/117 (32%), Positives = 67/117 (57%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGK GGV++ + + A ++L + LVT QTG G++ +++
Sbjct: 46 KAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLI 98
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
E ++EYY+ ++++R+ + V++AS +GG IE+VA + P+ I ID G+
Sbjct: 99 EEGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGL 155
Score = 37.9 bits (84), Expect = 0.12
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQV 137
++G +LR +G+ VP+ VA T +EA++ A L++ V+KAQ+
Sbjct: 6 YQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQI 49
>UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta
chain; n=1; Desulfotalea psychrophila|Rep: Probable
succinyl-CoA synthetase, beta chain - Desulfotalea
psychrophila
Length = 386
Score = 66.9 bits (156), Expect = 2e-10
Identities = 41/106 (38%), Positives = 58/106 (54%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGKG GGV++ T A +L LVT QTG +GR + +++
Sbjct: 45 KAQIHAGGRGKG-------GGVKLGKTATEVVQYADDILGMSLVTAQTGPSGRTVSKILL 97
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAI 444
E RE Y++I+++R IIA GG+NIE+VAA P+ I
Sbjct: 98 EEGVSIARELYLSILVDRERACITIIACQDGGMNIEEVAASTPERI 143
>UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1)
Length = 388
Score = 66.9 bits (156), Expect = 2e-10
Identities = 42/117 (35%), Positives = 64/117 (54%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGK GGV VN+ + A +IA ++L+ LVT QTG G ++V
Sbjct: 45 KAQIHAGGRGKA-------GGVARVNSVDQARNIAQRLLQHTLVTAQTGDQGLYVGSLLV 97
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
E RE Y+++ ++R+ +IAS GGV+IE A + P+ + ID + G+
Sbjct: 98 EEIVPVAREMYLSLTLDRANGRYCLIASPDGGVDIEQTARKTPERVRRLTIDPLVGL 154
>UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=99;
Proteobacteria|Rep: Succinyl-CoA synthetase beta chain -
Shigella flexneri
Length = 388
Score = 65.7 bits (153), Expect = 5e-10
Identities = 42/111 (37%), Positives = 60/111 (54%)
Frame = +1
Query: 142 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
AGGRGK GGV++VN+ E A L + LVT QT A G+ N ++V
Sbjct: 51 AGGRGKA-------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATD 103
Query: 322 PRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSG 474
+E Y+ +++RS V +AS++GGV IE VA E P I +D ++G
Sbjct: 104 IAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTG 154
>UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=16;
Gammaproteobacteria|Rep: Succinyl-CoA synthetase beta
chain - Haemophilus influenzae
Length = 389
Score = 65.7 bits (153), Expect = 5e-10
Identities = 42/111 (37%), Positives = 60/111 (54%)
Frame = +1
Query: 142 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
AGGRGK GGV++V E A A K L Q LVT QT G+ N + E
Sbjct: 51 AGGRGKA-------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCD 103
Query: 322 PRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSG 474
+E+Y++ +++R+ V IASS+GG+NIE+V +P + ID + G
Sbjct: 104 IDKEFYLSAVVDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTIDPLFG 154
>UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chain;
n=5; Escherichia coli|Rep: SucC, succinyl-CoA synthetase
beta chain - Escherichia coli (strain UTI89 / UPEC)
Length = 389
Score = 65.3 bits (152), Expect = 7e-10
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 142 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
AGGRGK GGV+++ A +ML LVT QTG G+ + +++ E +
Sbjct: 53 AGGRGKA-------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIY 105
Query: 322 P-RREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
P R+E Y ++++R I S +GGV IE VA E P+ I+ ID ++G+
Sbjct: 106 PVRQELYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGV 158
>UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta
subunit; n=3; Eutheria|Rep: Succinate-CoA ligase,
ADP-forming, beta subunit - Homo sapiens (Human)
Length = 154
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 370 GPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQ 489
GPV+I SS GGVNIEDVAAE+P+AI EPIDI GI +Q
Sbjct: 31 GPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQ 70
>UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7;
Chlamydiaceae|Rep: Succinyl-CoA synthetase beta chain -
Chlamydophila caviae
Length = 388
Score = 60.1 bits (139), Expect = 3e-08
Identities = 38/117 (32%), Positives = 58/117 (49%)
Frame = +1
Query: 142 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
AGGRGK GGV + +P K+L+ V+ QT V++T
Sbjct: 51 AGGRGKN-------GGVVVAKSPSDILAAVDKLLRMRFVSNQTSGEALPVEKVLITPLVN 103
Query: 322 PRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQI 492
EYY+A++M+R P I+ S GGV+IE+VA + PD + P+ + + + QI
Sbjct: 104 IAAEYYLAVIMDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPLTPFARLYNYQI 160
>UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Roseovarius|Rep: Succinyl-CoA synthetase beta subunit -
Roseovarius sp. 217
Length = 391
Score = 59.3 bits (137), Expect = 5e-08
Identities = 33/100 (33%), Positives = 47/100 (47%)
Frame = +1
Query: 160 GTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYY 339
G GL GG+R TP D A ++L LVT QTG AG +V + + +
Sbjct: 50 GAGGRGLAGGIRFAATPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCF 109
Query: 340 VAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPI 459
VAI ++ P+++AS GGV E A + D P+
Sbjct: 110 VAIALDPETGQPMLLASGAGGVEFEQRARMDEDTAQSCPL 149
Score = 35.1 bits (77), Expect = 0.86
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQV 137
++ LL +G+ VP+ A+T DEA + E++ + V+KAQ+
Sbjct: 6 YQSKELLAQYGVHVPEGRPARTPDEAQRLCKEIDARKYVVKAQI 49
>UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Symbiobacterium thermophilum|Rep: Succinyl-CoA
synthetase beta subunit - Symbiobacterium thermophilum
Length = 373
Score = 58.4 bits (135), Expect = 8e-08
Identities = 42/117 (35%), Positives = 62/117 (52%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGK GG+++ NTPE A + A ++L L G I + V+V
Sbjct: 44 KAQVLVGGRGKA-------GGIKLANTPEEARERAREILGMNL-------KGYIVDKVLV 89
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
+ +EYYV+I ++ P+++AS GGV IE V D I +E IDI +G+
Sbjct: 90 DPQIKIEKEYYVSITLDGMAKKPLVMASEYGGVEIESVP---HDKIVFEHIDIETGL 143
>UniRef50_Q8D2D7 Cluster: SucC protein; n=4;
Gammaproteobacteria|Rep: SucC protein - Wigglesworthia
glossinidia brevipalpis
Length = 396
Score = 56.4 bits (130), Expect = 3e-07
Identities = 33/116 (28%), Positives = 63/116 (54%)
Frame = +1
Query: 142 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
AGGRGK GG+++ N+ + + A K L L+T QT G+ N +++ ++
Sbjct: 51 AGGRGKS-------GGIKITNSKKEIHEFAKKWLGNKLITYQTDKNGQKVNYLLIEKKTI 103
Query: 322 PRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDDQ 489
++E Y++ ++ R + ++I+S GGV+IE++ + + I E ++ I D Q
Sbjct: 104 IKKELYLSFVINRKKSSIMLISSDSGGVDIENIFKKKSNNIYKEILESCYLIQDFQ 159
>UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n=1;
unknown|Rep: UPI00015B9071 UniRef100 entry - unknown
Length = 384
Score = 56.0 bits (129), Expect = 4e-07
Identities = 30/104 (28%), Positives = 57/104 (54%)
Frame = +1
Query: 163 TFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYV 342
T K G GG++ N E A +A ++L + GA V++ ++ E+Y
Sbjct: 50 TGKRGKAGGIKPANAAEEARGVAERILGMTIDCHAVGA-------VLLEQQATIASEFYA 102
Query: 343 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSG 474
A++++ + P+++ S++GG++IE+VAA PDA+ +D +G
Sbjct: 103 AVLIDTASRCPLVLFSTEGGMDIEEVAATRPDALRRHAVDPEAG 146
>UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Candidatus Vesicomyosocius okutanii HA|Rep: Succinyl-CoA
synthetase beta subunit - Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA)
Length = 386
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/106 (29%), Positives = 58/106 (54%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGKG GG+ + + E + ++L L+T QT A G + +++
Sbjct: 46 KAQIHAGGRGKG-------GGIILCRSIEEVKNACSQLLNSQLITPQTYAKGLPVSQLLI 98
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAI 444
+ E+Y+ ++++R ++AS++GG++IE VA + P+ I
Sbjct: 99 EIGENITHEFYLGLLIDRQTKKITVLASTKGGMDIEKVARKTPNQI 144
>UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2;
Candidatus Blochmannia|Rep: Succinyl-CoA synthetase beta
chain - Blochmannia floridanus
Length = 399
Score = 54.4 bits (125), Expect = 1e-06
Identities = 33/102 (32%), Positives = 56/102 (54%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + +GGRGK GGV++VN+ E A + + LVT QT G N +++
Sbjct: 48 KCQIRSGGRGKS-------GGVQIVNSMEDMLAFANRWFGKNLVTYQTTVDGERVNSILI 100
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAEN 432
E+Y++I+++R + + I S++GGV+IE+V E+
Sbjct: 101 EPAVNIAHEFYLSILIDRDLSNIICIVSTKGGVDIENVIHES 142
>UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Succinyl-CoA
synthetase, beta subunit - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 383
Score = 54.4 bits (125), Expect = 1e-06
Identities = 35/122 (28%), Positives = 63/122 (51%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGK GG+++ +PE A + A ++L + G +++
Sbjct: 45 KAQVLTGGRGKA-------GGIKVAESPEEAEEAARRILGMDI-------RGHTVRRLLI 90
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
RE Y++ M++R P+I+ S++GGV+IE+VA +P +I +D + G+
Sbjct: 91 ESGADIERELYLSAMVDRESRRPLILFSTEGGVDIEEVAERSPGSIVRLHVDPLVGLLPY 150
Query: 487 QI 492
Q+
Sbjct: 151 QV 152
>UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Euryarchaeota|Rep: Succinyl-CoA synthetase beta chain -
Methanococcus jannaschii
Length = 364
Score = 54.4 bits (125), Expect = 1e-06
Identities = 36/113 (31%), Positives = 58/113 (51%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGK GG+ + E + +K+ G ++V
Sbjct: 43 KAQVLVGGRGKA-------GGILFASNKE-------EFIKKAEELFNKEVKGEKVEKILV 88
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDI 465
E+ +EYYV+I+++R P+II S++GGV+IE+VA +NP+ I ID+
Sbjct: 89 EEKLPIEKEYYVSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDV 141
>UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=47;
Actinobacteria (class)|Rep: Succinyl-CoA synthetase beta
chain - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 398
Score = 54.4 bits (125), Expect = 1e-06
Identities = 38/121 (31%), Positives = 60/121 (49%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + GGRGK GGVR+ T A D A +L + G N VMV
Sbjct: 45 KAQVKVGGRGKA-------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMV 90
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
+ EYY +I+++R+ + + S +GG+ IE +A E P+A+ +D ++GI +D
Sbjct: 91 AQGADIAEEYYFSILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDED 150
Query: 487 Q 489
+
Sbjct: 151 K 151
>UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1;
Rhodopseudomonas palustris BisA53|Rep: Succinate--CoA
ligase - Rhodopseudomonas palustris (strain BisA53)
Length = 375
Score = 52.4 bits (120), Expect = 5e-06
Identities = 30/104 (28%), Positives = 54/104 (51%)
Frame = +1
Query: 163 TFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYV 342
T K G GG+R +TPE A + +L + G+ + V+V +R E+Y
Sbjct: 50 TGKRGKAGGIRPADTPEEARAVTRDILAMTI-------DGQDVSSVLVEQRADIADEFYA 102
Query: 343 AIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSG 474
A++ + + PV++ S +GGV IE A+ +P ++ +D++ G
Sbjct: 103 AVLCDTARRLPVVLFSPEGGVEIETTASRSPASLRRYEVDVLRG 146
>UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Halobacteriaceae|Rep: Succinyl-CoA synthetase beta chain
- Halobacterium salinarium (Halobacterium halobium)
Length = 382
Score = 52.4 bits (120), Expect = 5e-06
Identities = 39/111 (35%), Positives = 51/111 (45%)
Frame = +1
Query: 145 GGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFP 324
GGRGK G+K E A I G LK G + V+V E
Sbjct: 51 GGRGKA---GGIKLAENTAEAREAAESILGMDLK-----------GYTVDRVLVEEAVDF 96
Query: 325 RREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
E YV + M+RS PV++ S +GGV+IE VA E P+ I E +D G+
Sbjct: 97 TNELYVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGL 147
>UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Deinococcus radiodurans
Length = 386
Score = 51.6 bits (118), Expect = 9e-06
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 145 GGRGK-GTFKNGLKGGVRMVNTPEVAG-DIAGKMLKQLLVTKQTGA-AGRICNMVMVTER 315
GGRGK G K + N + G DI G + ++LVTK AG
Sbjct: 51 GGRGKAGGVKYSANEDKALENAKNILGMDIKGLTVNKVLVTKAVDIDAGT---------- 100
Query: 316 KFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
EYYV ++++R+ ++AS++GG+ IE+VAA NP+ I +D V+G+
Sbjct: 101 -----EYYVGMIVDRNVQSYTLMASAEGGMEIEEVAATNPEKIIRHRVDPVTGL 149
>UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8;
Thermoprotei|Rep: Succinyl-CoA synthetase beta chain -
Pyrobaculum aerophilum
Length = 382
Score = 50.0 bits (114), Expect = 3e-05
Identities = 28/103 (27%), Positives = 56/103 (54%)
Frame = +1
Query: 175 GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMM 354
G GG+++ N+PE A +++ +M G I + VT+ RE Y+++++
Sbjct: 54 GKAGGIKVANSPEEAYELSKRMFGM-------NIKGLIVKKLYVTKFVEVEREMYLSLII 106
Query: 355 ERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
+R+ + +AS GG++IE++A +P+ I +D +G+ D
Sbjct: 107 DRASRRYLFLASPVGGMDIEEIAKTSPEKIKRVYVDPATGLRD 149
>UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5;
Bacteroides|Rep: Succinyl-CoA synthetase beta chain -
Bacteroides fragilis
Length = 382
Score = 48.0 bits (109), Expect = 1e-04
Identities = 33/119 (27%), Positives = 58/119 (48%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGK GGV++ N A +L+ + G +++
Sbjct: 46 KAQVLTGGRGKA-------GGVKLANNDRDVYQYAQTILEMTI-------KGYPVTKILL 91
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
+E EYY++ ++R+ +I S+ GG++IE+VA ++P+ I ID + G+ D
Sbjct: 92 SEAVNIAAEYYISFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPD 150
>UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), beta
chain; n=3; Methanococcus maripaludis|Rep: Succinate-CoA
ligase (ADP-forming), beta chain - Methanococcus
maripaludis
Length = 362
Score = 48.0 bits (109), Expect = 1e-04
Identities = 37/127 (29%), Positives = 63/127 (49%)
Frame = +1
Query: 64 PKPXMRQLSLPQNSIPKTSF*KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKML 243
P P + +S SI K + L GGRGK GG+ + D A + +
Sbjct: 18 PIPKNKLVSGKVESIDYPVVIKAQVLVGGRGKA-------GGILFADNV----DDANEKI 66
Query: 244 KQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVA 423
+ L+ G + V++ E+ +EYYV +++ R+ V+I S++GGV+IE+VA
Sbjct: 67 ESLIGNT---VKGELVEKVLLEEQIKIVKEYYVGVVVNRNEKNNVVIFSTEGGVDIEEVA 123
Query: 424 AENPDAI 444
++ P+ I
Sbjct: 124 SKTPEKI 130
>UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Methanomicrobiales|Rep: Succinyl-CoA synthetase,
beta subunit - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 361
Score = 48.0 bits (109), Expect = 1e-04
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +1
Query: 145 GGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFP 324
GGRGK G+ N +VA D+ K +K L V K ++V E
Sbjct: 51 GGRGKA---GGILPA-NAENISDVARDLFAKTIKGLPVEK-----------ILVEEALEI 95
Query: 325 RREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPID 462
EYY++I ++R+ P+I+ SS+GGV IE +A E P+A+ +D
Sbjct: 96 SHEYYLSITIDRAKKMPLILFSSEGGVEIETLAKERPEALRRVYVD 141
>UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 390
Score = 47.2 bits (107), Expect = 2e-04
Identities = 35/112 (31%), Positives = 55/112 (49%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + +AGGRGK G + PE A A ++L + G +++
Sbjct: 45 KAQVMAGGRGKA-------GLILPAADPEAAAKAAAQILGK-------EHHGEQVKKLLI 90
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPID 462
E+ RE Y +I M+ + PV++ S+QGG+ IE +AA NP+ + E ID
Sbjct: 91 EEQIEIAREVYASITMDFTEGKPVMMVSAQGGMEIESLAAANPELLIKEHID 142
>UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Archaea|Rep: Succinyl-CoA synthetase beta subunit -
Methanopyrus kandleri
Length = 359
Score = 46.0 bits (104), Expect = 5e-04
Identities = 30/95 (31%), Positives = 47/95 (49%)
Frame = +1
Query: 175 GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMM 354
G GG+ + PE A A K+L + G V+V E+ E+YV+I +
Sbjct: 55 GKAGGILFADDPEGARKAARKLLGSRI-------RGETVRKVLVEEKLDIAEEWYVSITL 107
Query: 355 ERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPI 459
+R+ PV++ S +GGV+IE+V E +PI
Sbjct: 108 DRAKRRPVLLVSREGGVDIEEVPDEKIARRYLDPI 142
>UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 380
Score = 45.6 bits (103), Expect = 6e-04
Identities = 32/112 (28%), Positives = 56/112 (50%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRG L GG++ ++P+ ++A +L + G ++V
Sbjct: 45 KAQVLVGGRG-------LAGGIKTASSPDELKEVAEALLS-------SDVKGLPVLKLLV 90
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPID 462
E+ +E YV I ++ PVI+AS++GG+ IE+ A +P+ I +D
Sbjct: 91 CEKVEVAKELYVGITIDGYSGKPVIVASTEGGMLIEETARTSPEKIAAIHVD 142
Score = 37.5 bits (83), Expect = 0.16
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
+E + +GIPVP+ VA T EA++ A E+ ++LKAQVL
Sbjct: 6 YEALDIFERNGIPVPRRGVASTMHEALRVAGEIG-YPVILKAQVL 49
>UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bifidobacterium|Rep: Succinyl-CoA synthetase beta chain
- Bifidobacterium longum
Length = 400
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +1
Query: 298 VMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPID 462
V+V E K EYYV+I ++R+ ++A++ GG +E++A E+P+A+ ID
Sbjct: 88 VLVAEAKNILHEYYVSISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHID 142
>UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n=6;
Thermoplasmatales|Rep: Succinyl-CoA synthetase beta
subunit - Thermoplasma volcanium
Length = 384
Score = 44.4 bits (100), Expect = 0.001
Identities = 29/98 (29%), Positives = 46/98 (46%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGK GG++ T E + +L T V++
Sbjct: 60 KSQILLGGRGKA-------GGIKFAKTDEELKNAVSTLLS-------TKVRNMTVTKVLI 105
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDV 420
+ + EYYV+I + R+ P++IAS+ GG+ IE+V
Sbjct: 106 EDMLNIKHEYYVSIALNRAAKSPMLIASAMGGMEIENV 143
>UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Caldivirga maquilingensis IC-167|Rep: Succinyl-CoA
synthetase, beta subunit - Caldivirga maquilingensis
IC-167
Length = 377
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +1
Query: 328 REYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
+EYYV++ ++RS +I+AS +GGV+IE++A +P+ I I G+ D
Sbjct: 96 KEYYVSVTIDRSSRTFIILASPEGGVDIEEIARTSPEKIYRGRIHPFEGLRD 147
>UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Vibrio cholerae NCTC 8457|Rep: Succinyl-CoA synthetase
beta chain - Vibrio cholerae NCTC 8457
Length = 148
Score = 42.7 bits (96), Expect = 0.004
Identities = 30/85 (35%), Positives = 44/85 (51%)
Frame = +1
Query: 142 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKF 321
AGGRGK GGV + +T E A K L + LVT QT A G+ + ++V E
Sbjct: 51 AGGRGKA-------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASN 103
Query: 322 PRREYYVAIMMERSFNGPVIIASSQ 396
E Y+ +++RS V +AS++
Sbjct: 104 IANELYLGAVVDRSTRRIVFMASTE 128
>UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=3; Clostridia|Rep:
ATP-dependent carboxylate-amine ligase-like, ATP-grasp -
Desulfitobacterium hafniense (strain DCB-2)
Length = 425
Score = 41.9 bits (94), Expect = 0.007
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + AGGRGK G V++VNTP+ A A ++L + + G V+V
Sbjct: 46 KGQVQAGGRGKA-------GIVKLVNTPDEAAAAAAEILSKTV-------KGLPVRKVLV 91
Query: 307 TERKFPRREYYVAIMME--RSFNGPVIIASSQGGVNIEDVAAENPDAITYEPID 462
E+ ++E+Y + ++ + P+++ S +GG++IE V + I +PI+
Sbjct: 92 EEKLDIKKEFYCSFVVNGAKEARSPMLMFSVEGGMDIESVPEDKLLKINVDPIN 145
>UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 372
Score = 41.9 bits (94), Expect = 0.007
Identities = 36/117 (30%), Positives = 58/117 (49%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + L GGRGK G V+ V T E A A ++L+ A G+ ++V
Sbjct: 45 KAQVLQGGRGKA-------GLVKFVRTKEEAQKEAERILE---------ATGK---KLLV 85
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
E RE YV+I ++ + +++A +GGV+IE +A P+ I E +D+ G+
Sbjct: 86 EEAVPYEREMYVSITVDAASGLAMVMACLEGGVDIEQIARTTPEKIIKEKVDMSLGL 142
>UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n=4;
Peptococcaceae|Rep: Succinyl-CoA synthetase beta subunit
- Pelotomaculum thermopropionicum
Length = 369
Score = 40.7 bits (91), Expect = 0.017
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +1
Query: 169 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAI 348
K G GG++ N+PE A A ++ + G V+V E+ +E Y++I
Sbjct: 50 KRGKAGGIKFPNSPEEAKKAAEEVFAMTI-------QGLPVEAVLVEEKLKIDKELYMSI 102
Query: 349 MMERSFNGPVIIASSQGGVNIEDVAAE 429
++ + PV+IAS+ GG++IE+ E
Sbjct: 103 TVDGAAKMPVLIASAYGGMDIEEQPEE 129
Score = 35.1 bits (77), Expect = 0.86
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 12 GYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVL 140
G L +G+PVPK +A DEA K A E+ V+K+QVL
Sbjct: 6 GKELFAKYGLPVPKGRMAPNPDEAAKIAAEIG-GPCVVKSQVL 47
>UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila
melanogaster|Rep: CG10622-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 112
Score = 40.3 bits (90), Expect = 0.023
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRM 198
K + LAGGRGKGTF NG KGGV +
Sbjct: 68 KAQILAGGRGKGTFDNGFKGGVHI 91
>UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family;
n=1; Thermofilum pendens Hrk 5|Rep: Transcriptional
regulator, Fis family - Thermofilum pendens (strain Hrk
5)
Length = 372
Score = 39.9 bits (89), Expect = 0.030
Identities = 34/111 (30%), Positives = 57/111 (51%)
Frame = +1
Query: 151 RGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRR 330
RG G K GL V+ PE A +A ++ + + G R V+V+ERK R
Sbjct: 51 RGWGRGKAGL---VKSAENPEEALKVA----QEFFLREFNGEKIRY---VLVSERKRILR 100
Query: 331 EYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITD 483
E Y++ M+ + G +++AS GGV++E++ ++ P + ID G+ D
Sbjct: 101 EMYLSFMVSSNPPGFLLLASKHGGVDVEEL-SKTPGGLLKIFIDPFEGLRD 150
>UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase beta subunit - Aquifex
aeolicus
Length = 436
Score = 39.5 bits (88), Expect = 0.040
Identities = 28/103 (27%), Positives = 50/103 (48%)
Frame = +1
Query: 169 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAI 348
K G G VR+ + P+ A L+++ + G + V+V E+ +E Y +I
Sbjct: 53 KRGKAGAVRVCSNPDEA-------LEEIETLLRMTVYGEMPVGVLVVEKANILKELYASI 105
Query: 349 MMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGI 477
+ PV+ S +GG++IE+V PD + PI+ + G+
Sbjct: 106 VYSTDHRAPVLTLSLEGGMDIEEVP---PDKVKSWPINPLKGL 145
>UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: Succinyl
CoA ligase beta subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 172
Score = 39.5 bits (88), Expect = 0.040
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 145 GGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFP 324
GGRGK GGV + + + A +L LVTKQTG G N+V+V +
Sbjct: 52 GGRGKA-------GGVTLAKSLDEVEAAAEAILGMTLVTKQTGPEGLPVNLVLVEQGSDI 104
Query: 325 RREYYVAIMMERS 363
RE Y+ +++R+
Sbjct: 105 ARELYLGALLDRA 117
>UniRef50_Q39YX4 Cluster: Succinyl-CoA synthetase beta subunit-like;
n=1; Geobacter metallireducens GS-15|Rep: Succinyl-CoA
synthetase beta subunit-like - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 423
Score = 38.7 bits (86), Expect = 0.070
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 331 EYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPI 459
E YV+I + PV++ +++GGV++EDV E+ I + P+
Sbjct: 107 EIYVSISESSEYRMPVLLLTTKGGVDVEDVPPEDKRTIVFNPV 149
>UniRef50_Q8ZTH6 Cluster: Putative uncharacterized protein PAE3249;
n=3; Thermoproteaceae|Rep: Putative uncharacterized
protein PAE3249 - Pyrobaculum aerophilum
Length = 232
Score = 38.3 bits (85), Expect = 0.092
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 9 EGYTLLRDHGIPVPKFNVAKTXDEAIKFATEL 104
E LLR +GIPVP+F VA+ +EA+K A E+
Sbjct: 21 EALALLRAYGIPVPEFAVARDEEEAVKAAEEI 52
>UniRef50_Q9V1X5 Cluster: AcdB acetate--coA ligase (ADP-forming) (EC
6.2.1.13), beta chain; n=8; Thermococcaceae|Rep: AcdB
acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta
chain - Pyrococcus abyssi
Length = 232
Score = 37.1 bits (82), Expect = 0.21
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 9 EGYTLLRDHGIPVPKFNVAKTXDEAIKFATEL 104
E +L+ +GIP+P+F VA+ +EA+KF+ E+
Sbjct: 25 EAKEILKLYGIPIPEFKVARDEEEAVKFSREI 56
>UniRef50_A2SRS8 Cluster: CoA-binding domain protein; n=4;
Methanomicrobiales|Rep: CoA-binding domain protein -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 707
Score = 37.1 bits (82), Expect = 0.21
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 9 EGYTLLRDHGIPVPKFNVAKTXDEAIKFATEL 104
+GY LLR +P P F + +T D+A K AT++
Sbjct: 33 DGYDLLRQFNVPAPAFEIVQTPDDAAKAATKI 64
>UniRef50_A2BMF5 Cluster: Conserved archaeal protein; n=2;
Archaea|Rep: Conserved archaeal protein - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 238
Score = 36.7 bits (81), Expect = 0.28
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLK 128
HE Y + +G+PVP++ +A+ DEA + + E+ +VLK
Sbjct: 22 HEAYAVAEAYGLPVPRYGLARDPDEAARLSREIGF-PVVLK 61
>UniRef50_Q8R6L7 Cluster: UDP-N-acetylmuramyl tripeptide synthase;
n=4; Clostridia|Rep: UDP-N-acetylmuramyl tripeptide
synthase - Thermoanaerobacter tengcongensis
Length = 879
Score = 35.9 bits (79), Expect = 0.49
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 21 LLRDHGIPVPKFNVAKTXDEAIKFATEL 104
+L+DHG+PVP+ +VA +EAI A EL
Sbjct: 219 ILKDHGLPVPEGDVAYNEEEAISIAEEL 246
>UniRef50_A2EVI4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 398
Score = 35.5 bits (78), Expect = 0.65
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -1
Query: 360 AFHHNCHVVFPAWELPLCDHDHVANSSCCPCLFCY*ELFKHLSCYITSNFRCVDHSNSTF 181
+ H C WE PLC + +++ S PC C + C + C DH+ F
Sbjct: 158 SMHTTCAQRMKQWECPLCRYAPISSLSLSPCEVCG-TFDRPYICLSCARSFCYDHALEHF 216
Query: 180 KSILKGTFPSTTSQE 136
K+ G S +E
Sbjct: 217 KNTGHGYCASADGRE 231
>UniRef50_Q18I19 Cluster: Probable cationic amino acid transport
protein; n=1; Haloquadratum walsbyi DSM 16790|Rep:
Probable cationic amino acid transport protein -
Haloquadratum walsbyi (strain DSM 16790)
Length = 486
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 107 YQRHRSKSTGSWLVVEGKVPLRMDLKVEFEWSTHLK 214
Y RHR T + V G VPL ++++VEF++ T K
Sbjct: 442 YVRHRVVDTSALAVYRGAVPLEIEVEVEFDFDTPSK 477
>UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3;
Chroococcales|Rep: Succinate--CoA ligase - Synechocystis
sp. (strain PCC 6803)
Length = 401
Score = 33.5 bits (73), Expect = 2.6
Identities = 29/109 (26%), Positives = 50/109 (45%)
Frame = +1
Query: 88 SLPQNSIPKTSF*KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQ 267
+L + IP K + AGGRGK GGVR V + A + L +
Sbjct: 30 ALKRLQIPYPMVLKSQVRAGGRGKA-------GGVRFVENT-IDAIAAASAIFHLPI--- 78
Query: 268 TGAAGRICNMVMVTERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIE 414
A +++ R + E ++AI+++ PV++ SS+GG+++E
Sbjct: 79 ---ADEYPEVILAEARYDAQSELFLAIVLDYQRQCPVLMGSSEGGIDVE 124
>UniRef50_A0GFR9 Cluster: CoA-binding; n=1; Burkholderia
phytofirmans PsJN|Rep: CoA-binding - Burkholderia
phytofirmans PsJN
Length = 750
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQ 134
H LLRD+GI VPK +A+ D+A A + +V+K Q
Sbjct: 509 HASQALLRDYGIDVPKSGLAQNRDQACALARAIGF-PLVIKVQ 550
>UniRef50_Q9FKD7 Cluster: E3 ubiquitin-protein ligase SINA-like 7;
n=4; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase SINA-like 7 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 286
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -1
Query: 348 NCHVVFPAWELPL--CDHDHVANSSCCPCL 265
+C + + A+ +P+ CD+ H+A SSCCP L
Sbjct: 50 DCPICYEAFTIPIFQCDNGHLACSSCCPKL 79
>UniRef50_A5DPX5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 413
Score = 33.1 bits (72), Expect = 3.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 351 HNCHVVFPAWELPLCDHDHVANSSCC 274
H C F W +P C H H +NS CC
Sbjct: 343 HGCTNTFTDWRIP-CFHSHFSNSLCC 367
>UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4;
Sulfolobaceae|Rep: Succinyl-CoA synthetase beta chain -
Sulfolobus acidocaldarius
Length = 337
Score = 33.1 bits (72), Expect = 3.5
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 328 REYYVAIMMERSFNGPVIIASSQGGVNIE 414
RE Y++ +++R P+I AS++GG++IE
Sbjct: 83 RELYISALIDRDTAEPIIAASTEGGIDIE 111
>UniRef50_A3DNX4 Cluster: ATP-grasp domain protein; n=1;
Staphylothermus marinus F1|Rep: ATP-grasp domain protein
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 231
Score = 33.1 bits (72), Expect = 3.5
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLK 128
HE + +++ + IP P+ +A++ +EAIK A ++ +VLK
Sbjct: 21 HEAFEIIKAYNIPAPETAIARSLEEAIKIAEKIG-YPLVLK 60
>UniRef50_P77886 Cluster: Carbamoyl-phosphate synthase
pyrimidine-specific large chain; n=32; Firmicutes|Rep:
Carbamoyl-phosphate synthase pyrimidine-specific large
chain - Lactobacillus plantarum
Length = 1058
Score = 33.1 bits (72), Expect = 3.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 3 RHEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVLG 143
R + L+ + G PVP +A+T DEA+ FA + IV A +G
Sbjct: 129 REQFKALMEELGEPVPASGIARTVDEALAFAKQAGYPVIVRPAFTMG 175
>UniRef50_Q6RGR4 Cluster: SLV.6; n=1; Streptomyces lavendulae|Rep:
SLV.6 - Streptomyces lavendulae
Length = 814
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 284 RPAAPVCFVTRSCLSIFPAISPATSGVLTIRTPPL 180
RP + V RS + P+IS T G +T+R PPL
Sbjct: 729 RPESLAWIVDRSAATAAPSISTKTLGTMTVRLPPL 763
>UniRef50_Q1NU51 Cluster: Cyanophycin synthetase; n=3; delta
proteobacterium MLMS-1|Rep: Cyanophycin synthetase -
delta proteobacterium MLMS-1
Length = 891
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 21 LLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIV 122
LL DHG+PVP +A ++A+K A +L +V
Sbjct: 232 LLVDHGLPVPPAGLAANLEQAVKLAEQLGWPVVV 265
>UniRef50_Q653A4 Cluster: Basic helix-loop-helix-like; n=4; Oryza
sativa|Rep: Basic helix-loop-helix-like - Oryza sativa
subsp. japonica (Rice)
Length = 396
Score = 32.7 bits (71), Expect = 4.6
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -2
Query: 287 IRPAAPVCFVTRSCLSIFPAISPATSGVLTIRTPPLSPFLKVPF-PRPP 144
+ P P C P +SP L TPPLSP L VP PR P
Sbjct: 206 LSPRPPATVAASCCSPRPPQLSPRLPPQLLKSTPPLSPRLAVPISPRTP 254
>UniRef50_O80261 Cluster: Orf 498; n=1; Vibrio phage fs2|Rep: Orf
498 - Vibrio phage fs2
Length = 498
Score = 32.7 bits (71), Expect = 4.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 139 LAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMV 300
L GG K +N +K + +NTP +A I + Q +V TG A N+V
Sbjct: 48 LGGGSCKRDTRNFIKASISSINTPHIAYRIDKYLDDQCIVLSSTGNASVTLNVV 101
>UniRef50_Q9J541 Cluster: Viral replication protein A28-like; n=4;
Avipoxvirus|Rep: Viral replication protein A28-like -
Fowlpox virus (FPV)
Length = 141
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = -1
Query: 219 SNFRCVDHSNSTFKSILKGTFPSTTSQEPVL---LERCLWY 106
+ +RCV+++N+ + S K + +T+S+ PVL LE C++Y
Sbjct: 70 AKWRCVNYNNNQYASASKFGYLATSSRNPVLFTNLEDCVYY 110
>UniRef50_A1YJ62 Cluster: DNA helicase; n=8; Nucleopolyhedrovirus|Rep:
DNA helicase - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 1228
Score = 32.3 bits (70), Expect = 6.0
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +1
Query: 169 KNGLKGGVRMVNTP------EVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRR 330
K +K G RMV+ E+A ML +LLVTK+T A R + +RKF +
Sbjct: 1140 KVNVKPGARMVDESKIEKMIELAVPYVETMLHELLVTKRTNVAQRTAMLFDAFKRKF--K 1197
Query: 331 EYYVAIMMERSFNGPVIIASSQGGVNI 411
+YY + ER + +A ++G NI
Sbjct: 1198 KYY---LEERKIFYNIDMAWNKGDFNI 1221
>UniRef50_Q7V433 Cluster: Putative uncharacterized protein
precursor; n=1; Prochlorococcus marinus str. MIT
9313|Rep: Putative uncharacterized protein precursor -
Prochlorococcus marinus (strain MIT 9313)
Length = 665
Score = 32.3 bits (70), Expect = 6.0
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 70 PXMRQLSLPQNS-IPKTSF*KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAG 234
P +++P N+ I K RFL GGR G N +KGG R + P G G
Sbjct: 172 PGSAAIAVPSNTRIQKGVRGYKRFLKGGRTFGKASNAIKGGGRSSSRPSSPGQSPG 227
>UniRef50_A1W4H9 Cluster: Putative uncharacterized protein; n=1;
Acidovorax sp. JS42|Rep: Putative uncharacterized
protein - Acidovorax sp. (strain JS42)
Length = 207
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 12 GYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVLGWWSRE 158
G + +HG P+ ++ AKT + KF ++ D+ L+A W SR+
Sbjct: 132 GIQTVTEHGAPIRVYSAAKTVADCFKFRNKIGL-DVALEALKDAWRSRK 179
>UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Succinate--CoA ligase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 368
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 325 RREYYVAIMMERSFNGPVIIASSQGGVNIEDV 420
++E Y++I + RS IIAS +GGV IE V
Sbjct: 97 KKELYLSIFLNRSKRCYTIIASDEGGVEIESV 128
>UniRef50_Q982N4 Cluster: ABC transporter, permease protein; n=1;
Mesorhizobium loti|Rep: ABC transporter, permease
protein - Rhizobium loti (Mesorhizobium loti)
Length = 338
Score = 31.9 bits (69), Expect = 8.0
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 112 KTSF*KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRI 288
KT F +H + GG TF+ G++ ++ +AG IAG + LL + +GA +
Sbjct: 202 KTPFGRHLVMIGGNETATFRAGIRVNRNLIIAFVLAGAIAG-LAGWLLAIRTSGATANL 259
>UniRef50_A1IDG9 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 253
Score = 31.9 bits (69), Expect = 8.0
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 6 HEGYTLLRDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKA 131
+E +L +G+PV + +AKT DEA+ A EL +VLKA
Sbjct: 45 YEAKQVLAAYGVPVTREVLAKTPDEAVAAAGELG-YPVVLKA 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,020,414
Number of Sequences: 1657284
Number of extensions: 10314646
Number of successful extensions: 32498
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 31220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32454
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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