Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0617
(492 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0655 + 24761323-24761424,24761565-24761675,24762361-247624... 122 2e-28
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 31 0.38
12_02_0299 - 17051570-17052474,17053542-17053755 29 1.5
12_01_0484 + 3840020-3840152,3840261-3840390,3840467-3841004 29 1.5
07_03_1293 - 25563431-25563545,25564078-25564196,25564300-255644... 29 2.0
05_04_0399 - 20955319-20955838,20955939-20956201 29 2.0
01_06_1518 + 37925609-37925871,37925954-37926554 29 2.0
08_02_1487 - 27479463-27479988,27481625-27481887 29 2.7
12_01_0158 - 1199788-1200590,1200724-1200856 28 3.5
11_01_0159 - 1318825-1319618,1319722-1319854 28 3.5
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175 28 3.5
09_06_0104 - 20888338-20888830,20888988-20889250 28 3.5
09_06_0062 - 20614443-20615037,20615720-20615842,20617967-20618229 28 3.5
01_01_1236 - 10020837-10021041,10021746-10021831,10022552-100230... 28 4.7
07_03_0517 + 19000050-19000427,19000539-19000766,19001142-190012... 27 6.2
04_04_1442 + 33628102-33628246,33628352-33628494,33628618-336288... 27 6.2
02_05_0097 + 25796725-25796857,25797366-25797495,25798273-257988... 27 6.2
01_06_0367 + 28789824-28790110,28790204-28790744 27 6.2
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 27 8.2
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615... 27 8.2
01_07_0366 + 43088835-43089099,43089311-43089876 27 8.2
>02_04_0655 +
24761323-24761424,24761565-24761675,24762361-24762472,
24763049-24763113,24763727-24763804,24764550-24764624,
24764747-24764899,24764988-24765122,24765325-24765495
Length = 333
Score = 122 bits (293), Expect = 2e-28
Identities = 63/120 (52%), Positives = 82/120 (68%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRG GTFK+GL+GGV +V E A +A KML Q+LVTKQTG G+I + V +
Sbjct: 75 KSQILAGGRGLGTFKSGLQGGVHIVKAEE-AESLAAKMLGQILVTKQTGPQGKIVSKVYL 133
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E+ E Y AI ++R+ GP+IIA S+GG +IED+A + PD I PID+ GITDD
Sbjct: 134 CEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDD 193
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +1
Query: 208 PEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMVTERKFPRREYYVAIMMERSFNGPVIIA 387
PE++ D K L++L +Q G+ + ++ +++++FP ++ + + FN
Sbjct: 517 PEISADQREKYLQRLQQVQQQGSLLNVSHITGISQKQFPSQQPNPLL---QQFNSQSSSI 573
Query: 388 SSQGGVNIEDV 420
SSQ G+ + V
Sbjct: 574 SSQAGIGLGQV 584
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 281 PAAPVCFVT-RSCLSIFPAISPATSGVLTIRTPPLSPFLKVPFPRPPA 141
P P+ F T R P ++P L PP+ PFL P P PPA
Sbjct: 213 PWPPIPFCTPRPWFPPIPFLTPPPPPFLPFPLPPI-PFLTPPSPPPPA 259
>12_01_0484 + 3840020-3840152,3840261-3840390,3840467-3841004
Length = 266
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ G++P R D +++ W+TH+K
Sbjct: 89 WSLIAGRLPGRTDNEIKNYWNTHIK 113
>07_03_1293 -
25563431-25563545,25564078-25564196,25564300-25564467,
25564565-25564627,25564709-25564816,25565125-25565237,
25565313-25565609,25565724-25565802,25566116-25566224,
25566324-25566365,25567023-25567153,25568100-25568648
Length = 630
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 239 IFPAISPATSGVLTIRTPPLSPFLKVPFPRP-PAKNL 132
+F A SP S + T P L++PFP P PAK++
Sbjct: 65 LFSASSPRRSPAPSAPTTPARRLLRLPFPPPSPAKHI 101
>05_04_0399 - 20955319-20955838,20955939-20956201
Length = 260
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ G++P R D +++ W+TH+K
Sbjct: 89 WSLIAGQLPGRTDNEIKNYWNTHIK 113
>01_06_1518 + 37925609-37925871,37925954-37926554
Length = 287
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ G++P R D +++ W+TH+K
Sbjct: 89 WSLIAGQLPGRTDNEIKNYWNTHIK 113
>08_02_1487 - 27479463-27479988,27481625-27481887
Length = 262
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 122 SKSTGSWLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
+K W + K+P R D +++ W+TH+K +I
Sbjct: 83 AKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLI 117
>12_01_0158 - 1199788-1200590,1200724-1200856
Length = 311
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 80 GN*VCHRTQYQRHRSKSTGS-WLVVEGKVPLRMDLKVEFEWSTHLK 214
GN H H G+ W + +P R D ++ W+THLK
Sbjct: 68 GNFTAHEEGIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLK 113
>11_01_0159 - 1318825-1319618,1319722-1319854
Length = 308
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 80 GN*VCHRTQYQRHRSKSTGS-WLVVEGKVPLRMDLKVEFEWSTHLK 214
GN H H G+ W + +P R D ++ W+THLK
Sbjct: 68 GNFTAHEEGIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLK 113
>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
Length = 294
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 122 SKSTGSWLVVEGKVPLRMDLKVEFEWSTHLK 214
SK SW + ++P R DL V+ W++ LK
Sbjct: 73 SKKGSSWSAIAAQLPGRTDLAVKNYWNSTLK 103
>09_06_0104 - 20888338-20888830,20888988-20889250
Length = 251
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ G++P R D +++ W+TH++
Sbjct: 89 WSLIAGRLPGRTDNEIKNYWNTHIR 113
>09_06_0062 - 20614443-20615037,20615720-20615842,20617967-20618229
Length = 326
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
W + K+P R D +++ W+TH+K +I
Sbjct: 130 WSKIAAKLPGRTDNEIKNHWNTHIKKKLI 158
>01_01_1236 -
10020837-10021041,10021746-10021831,10022552-10023061,
10023914-10025965
Length = 950
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -2
Query: 428 SAATSSMLTPP*DEAMMTGPLKLRSIIIAT*YSLRGNFLSVTMTMLQIR 282
SAAT ++ TP ++ L LRS+I++ + L +S T+T L +R
Sbjct: 526 SAATEAISTPSVAPGSLSSTLNLRSLILSGDFFLAA-VISCTLTKLVLR 573
>07_03_0517 +
19000050-19000427,19000539-19000766,19001142-19001221,
19001222-19001441,19001571-19001713,19002023-19002160,
19002295-19002376
Length = 422
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 378 DWTIETAFHHNCHVVFPAWE 319
D T A H NCH+VFP E
Sbjct: 5 DLTARMAAHMNCHLVFPLLE 24
>04_04_1442 +
33628102-33628246,33628352-33628494,33628618-33628831,
33628925-33629159,33629285-33629372,33629526-33629885
Length = 394
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 269 VCFVTRSCLSIFPAISPATSGVLTIRTPPLSPFLKVPFPRPPA 141
VC + C+ FP + PA S V+ + T + +P P PA
Sbjct: 306 VCQIALLCVQPFPNLRPAMSEVVLMLTMKTTEQSVIPAPVRPA 348
>02_05_0097 +
25796725-25796857,25797366-25797495,25798273-25798842,
25799604-25799650,25799908-25799976,25801437-25801699
Length = 403
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ ++P R D +++ W+THLK
Sbjct: 89 WSMIAAQLPGRTDNEIKNYWNTHLK 113
>01_06_0367 + 28789824-28790110,28790204-28790744
Length = 275
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLKLLVI*Q 232
W ++ G++P R D +++ W++HL +I Q
Sbjct: 97 WSLIAGRLPGRTDNEIKNYWNSHLSKKLIAQ 127
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 233 PAISPATSGVLTIRTPPLSPFLKVPFPRPP 144
P +SP ++ V + PP P +P P PP
Sbjct: 105 PGVSPTSAAVDAMMMPPPPPIDTLPPPPPP 134
>04_04_0243 -
23858975-23860706,23861178-23861230,23861338-23861538,
23861649-23861990,23862277-23862423,23862945-23863086,
23863876-23863959,23864772-23864779
Length = 902
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 230 AISPATSGVLTIRTPPLSPFLKVPFPR 150
+++ S LTIR+ P++P P PR
Sbjct: 196 SVTEEASDALTIRSDPITPITNPPLPR 222
>01_07_0366 + 43088835-43089099,43089311-43089876
Length = 276
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 98 RTQYQRHRSKSTGSWLVVEGKVPLRMDLKVEFEWSTHLKLLVI*QER 238
R Q H +K W + +P R D +++ W THL+ L + Q++
Sbjct: 120 RMVVQLH-AKLGNRWSRIAKSIPGRTDNEIKNYWRTHLRKLKLKQQK 165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,947,544
Number of Sequences: 37544
Number of extensions: 307917
Number of successful extensions: 1063
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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