Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0617
(492 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 1.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 314 LSVTMTMLQIRPAAPVCFVTRSCLS 240
L T+T+ Q+ P+APV +VT S S
Sbjct: 1395 LHYTLTV-QVPPSAPVLYVTSSTSS 1418
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 314 LSVTMTMLQIRPAAPVCFVTRSCLS 240
L T+T+ Q+ P+APV +VT S S
Sbjct: 1391 LHYTLTV-QVPPSAPVLYVTSSTSS 1414
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.0 bits (47), Expect = 1.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 128 STGSWLVVEGKVP 166
STG WL+ E K+P
Sbjct: 72 STGEWLLTEEKLP 84
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 2 ERPVANESEPLEVKFGITLQQI 23
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 2 ERPVANESEPLEVKFGITLQQI 23
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 2 ERPVANESEPLEVKFGITLQQI 23
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 2 ERPVANESEPLEVKFGITLQQI 23
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 2 ERPVANESEPLEVKFGITLQQI 23
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 2 ERPVANESEPLEVKFGITLQQI 23
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 70 ERPVANESEPLEVKFGITLQQI 91
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 427 ENPDAITYEPIDIVSGITDDQI 492
E P A EP+++ GIT QI
Sbjct: 70 ERPVANESEPLEVKFGITLQQI 91
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 116 HRSKSTGSWLVVEGKVPLRMDLKVEFEW 199
H + G + +V G R+ VEF+W
Sbjct: 371 HDVEFPGXYTMVIGSGVYRIGSSVEFDW 398
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,061
Number of Sequences: 438
Number of extensions: 2941
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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