Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0617
(492 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 122 1e-28
At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putat... 33 0.079
At5g07690.1 68418.m00882 myb family transcription factor (MYB29)... 31 0.32
At1g35515.1 68414.m04409 myb family transcription factor (MYB8) ... 31 0.56
At5g37870.1 68418.m04561 seven in absentia (SINA) family protein... 30 0.97
At3g13540.1 68416.m01702 myb family transcription factor contain... 30 0.97
At1g74080.1 68414.m08580 myb family transcription factor (MYB122... 30 0.97
At5g07700.1 68418.m00883 myb family transcription factor (MYB76)... 29 1.3
At4g09460.1 68417.m01557 myb family transcription factor 29 1.3
At1g22640.1 68414.m02828 myb family transcription factor (MYB4) ... 29 1.3
At5g61420.2 68418.m07707 myb family transcription factor (MYB28)... 29 2.2
At5g61420.1 68418.m07706 myb family transcription factor (MYB28)... 29 2.2
At5g52600.1 68418.m06531 myb family transcription factor (MYB82)... 29 2.2
At4g38620.1 68417.m05465 myb family transcription factor (MYB4) ... 29 2.2
At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 28 3.0
At4g34610.1 68417.m04916 homeodomain-containing protein similari... 28 3.9
At3g23250.1 68416.m02931 myb family transcription factor (MYB15)... 28 3.9
At2g31180.1 68415.m03807 myb family transcription factor (MYB14)... 28 3.9
At1g06180.1 68414.m00650 myb family transcription factor identic... 28 3.9
At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)... 27 5.2
At3g47600.1 68416.m05182 myb family transcription factor (MYB94)... 27 5.2
At3g28910.1 68416.m03608 myb family transcription factor (MYB30)... 27 5.2
At5g37910.1 68418.m04567 seven in absentia (SINA) family protein... 27 6.9
At5g16770.2 68418.m01964 myb family transcription factor (MYB9) ... 27 6.9
At5g16770.1 68418.m01963 myb family transcription factor (MYB9) ... 27 6.9
At5g10280.1 68418.m01193 myb family transcription factor (MYB92)... 27 6.9
At4g31120.2 68417.m04418 Skb1 methyltransferase family protein c... 27 6.9
At4g31120.1 68417.m04417 Skb1 methyltransferase family protein c... 27 6.9
At3g61250.1 68416.m06855 myb family transcription factor (MYB17)... 27 6.9
At2g16720.1 68415.m01918 myb family transcription factor contain... 27 6.9
At1g16490.1 68414.m01972 myb family transcription factor (MYB58)... 27 6.9
At5g65230.1 68418.m08206 myb family transcription factor (MYB53)... 27 9.1
At5g62470.2 68418.m07840 myb family transcription factor (MYB96)... 27 9.1
At5g62470.1 68418.m07839 myb family transcription factor (MYB96)... 27 9.1
At5g52490.1 68418.m06512 fibrillarin, putative similar to fibril... 27 9.1
At5g40330.1 68418.m04893 myb family transcription factor contain... 27 9.1
At5g14750.1 68418.m01731 myb family transcription factor (MYB66)... 27 9.1
At4g22680.1 68417.m03273 myb family transcription factor (MYB85)... 27 9.1
At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-g... 27 9.1
At3g27920.1 68416.m03483 trichome differentiation protein / GLAB... 27 9.1
At3g01140.1 68416.m00018 myb family transcription factor (MYB106... 27 9.1
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 27 9.1
At1g66610.1 68414.m07569 seven in absentia (SINA) protein, putat... 27 9.1
At1g63980.1 68414.m07247 D111/G-patch domain-containing protein ... 27 9.1
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 122 bits (294), Expect = 1e-28
Identities = 62/120 (51%), Positives = 84/120 (70%)
Frame = +1
Query: 127 KHRFLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGAAGRICNMVMV 306
K + LAGGRG GTFK+GLKGGV +V E A +IAGKML Q+LVTKQTG G++ + V +
Sbjct: 74 KSQILAGGRGLGTFKSGLKGGVHIVKRDE-AEEIAGKMLGQVLVTKQTGPQGKVVSKVYL 132
Query: 307 TERKFPRREYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAITYEPIDIVSGITDD 486
E+ E Y +I+++R GP+IIA +GG +IED+A + PD I PID+ +GITD+
Sbjct: 133 CEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDE 192
>At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 286
Score = 33.5 bits (73), Expect = 0.079
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -1
Query: 348 NCHVVFPAWELPL--CDHDHVANSSCCPCL 265
+C + + A+ +P+ CD+ H+A SSCCP L
Sbjct: 50 DCPICYEAFTIPIFQCDNGHLACSSCCPKL 79
>At5g07690.1 68418.m00882 myb family transcription factor (MYB29)
similar to myb transcription factor GI:3941436 from
[Arabidopsis thaliana]
Length = 336
Score = 31.5 bits (68), Expect = 0.32
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 116 HRSKSTGSWLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
H S+ W V+ +P R D +++ W+THLK L+I
Sbjct: 82 HASRGN-KWSVIARHLPKRTDNEIKNYWNTHLKKLLI 117
>At1g35515.1 68414.m04409 myb family transcription factor (MYB8)
similar to DNA-binding protein GB:AAA98761 GI:1020155
from [Arabidopsis thaliana]
Length = 212
Score = 30.7 bits (66), Expect = 0.56
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ GK+P R D +++ W+TH+K
Sbjct: 89 WSLIAGKLPGRTDNEIKNYWNTHIK 113
>At5g37870.1 68418.m04561 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 281
Score = 29.9 bits (64), Expect = 0.97
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -1
Query: 348 NCHVVFPAWELPL--CDHDHVANSSCCPCL 265
+C + + A ++P+ C + H+A SSCCP L
Sbjct: 44 DCPICYQALKIPVFQCGNGHLACSSCCPKL 73
>At3g13540.1 68416.m01702 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 249
Score = 29.9 bits (64), Expect = 0.97
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ G++P R D +++ W+THL+
Sbjct: 100 WSLIAGRIPGRTDNEIKNYWNTHLR 124
>At1g74080.1 68414.m08580 myb family transcription factor (MYB122)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 333
Score = 29.9 bits (64), Expect = 0.97
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
W + K+P R D +++ W+TH+K ++
Sbjct: 89 WSAIARKIPRRTDNEIKNHWNTHIKKCLV 117
>At5g07700.1 68418.m00883 myb family transcription factor (MYB76)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 338
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 116 HRSKSTGSWLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
H S+ W V+ +P R D +V+ W+THLK +I
Sbjct: 82 HASRGN-KWSVIARHLPKRTDNEVKNYWNTHLKKRLI 117
>At4g09460.1 68417.m01557 myb family transcription factor
Length = 236
Score = 29.5 bits (63), Expect = 1.3
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ G++P R D +++ W+TH+K
Sbjct: 89 WSLIAGRLPGRTDNEIKNYWNTHIK 113
>At1g22640.1 68414.m02828 myb family transcription factor (MYB4)
similar to myb-related protein GI:1020155 from
[Arabidopsis thaliana]
Length = 257
Score = 29.5 bits (63), Expect = 1.3
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ G++P R D +++ W+TH+K
Sbjct: 89 WSLIAGRLPGRTDNEIKNYWNTHIK 113
>At5g61420.2 68418.m07707 myb family transcription factor (MYB28)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 366
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 116 HRSKSTGSWLVVEGKVPLRMDLKVEFEWSTHLK 214
H S+ W V+ +P R D +++ W+THLK
Sbjct: 82 HASRGN-KWSVIARHLPRRTDNEIKNYWNTHLK 113
>At5g61420.1 68418.m07706 myb family transcription factor (MYB28)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 287
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 116 HRSKSTGSWLVVEGKVPLRMDLKVEFEWSTHLK 214
H S+ W V+ +P R D +++ W+THLK
Sbjct: 3 HASRGN-KWSVIARHLPRRTDNEIKNYWNTHLK 34
>At5g52600.1 68418.m06531 myb family transcription factor (MYB82)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA putative transcription factor
(MYB82) mRNA, partial cds GI:3941515
Length = 201
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHL 211
W ++ G++P R D +V+ W+THL
Sbjct: 89 WSLIAGRLPGRTDNEVKNYWNTHL 112
>At4g38620.1 68417.m05465 myb family transcription factor (MYB4)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 282
Score = 28.7 bits (61), Expect = 2.2
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
W ++ G++P R D +++ W+TH++ +I
Sbjct: 89 WSLIAGRLPGRTDNEIKNYWNTHIRRKLI 117
>At2g41830.1 68415.m05169 cyclin-related contains Pfam profile
PF02984: Cyclin, C-terminal domain
Length = 1025
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -3
Query: 151 DHQPRTCAFRTMSLVLSSVANLIASSSVLATLNLGTGIPWSRSR 20
DH+ R A R S+VL + SS L G G+P S SR
Sbjct: 503 DHKTRIGAHRIFSVVLVPTSVCPRPSSTTTDLKKGMGLPRSLSR 546
>At4g34610.1 68417.m04916 homeodomain-containing protein similaritry
to homeotic protein BEL1, Arabidopsis thaliana,
PIR2:A57632
Length = 532
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 279 RTNLQHGHGHREEVPTQGILRGNY-DGTQF 365
+T HGHG+ EE T+G+++G++ DG +F
Sbjct: 421 QTKPDHGHGYGEE--TRGMVQGSHMDGRRF 448
>At3g23250.1 68416.m02931 myb family transcription factor (MYB15)
similar to myb-related transcription factor GB:CAA66952
from [Lycopersicon esculentum]
Length = 285
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + K+P R D +++ W THLK
Sbjct: 89 WSAIAAKLPGRTDNEIKNVWHTHLK 113
>At2g31180.1 68415.m03807 myb family transcription factor (MYB14)
similar to myb-related transcription factor GI:1370140
from [Lycopersicon esculentum]
Length = 249
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + K+P R D +++ W THLK
Sbjct: 89 WSAIAAKLPGRTDNEIKNVWHTHLK 113
>At1g06180.1 68414.m00650 myb family transcription factor identical
to GB:CAA90748 GI:1263093 from [Arabidopsis
thaliana];contains PFAM profile:PF00249
Length = 246
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + K+P R D +++ W THLK
Sbjct: 89 WSAIAAKLPGRTDNEIKNVWHTHLK 113
>At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)
family protein similar to SP|P41972 Isoleucyl-tRNA
synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase)
(IleRS) {Staphylococcus aureus}; contains Pfam profile
PF00133: tRNA synthetases class I (I, L, M and V)
Length = 1093
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 27 RDHGIPVPKFNVAKTXDEAIKFATELNTKDIVLKAQVLGWW 149
R G+P+P F KT + + T + K I+ + WW
Sbjct: 587 RTWGVPIPAFYHVKTKEPLMNEETINHVKSIISQKGSDAWW 627
>At3g47600.1 68416.m05182 myb family transcription factor (MYB94)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA putative transcription factor
(MYB94) GI:3941527
Length = 333
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 80 GN*VCHRTQYQRHRSKSTGS-WLVVEGKVPLRMDLKVEFEWSTHLK 214
GN H + H G+ W + +P R D ++ W+THLK
Sbjct: 68 GNFTEHEEKMILHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLK 113
>At3g28910.1 68416.m03608 myb family transcription factor (MYB30)
identical to myb-like protein GB:AJ007289 [Arabidopsis
thaliana] (Plant J. 20 (1), 57-66 (1999))
Length = 323
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 80 GN*VCHRTQYQRHRSKSTGS-WLVVEGKVPLRMDLKVEFEWSTHLK 214
GN H + H G+ W + +P R D ++ W+THLK
Sbjct: 68 GNFTEHEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLK 113
>At5g37910.1 68418.m04567 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 276
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 348 NCHVVFPAWELPL--CDHDHVANSSCCPCL 265
+C + A P+ CD+ H+A SCCP L
Sbjct: 37 DCPICCEALTSPIFQCDNGHLACGSCCPKL 66
>At5g16770.2 68418.m01964 myb family transcription factor (MYB9)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 336
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + G +P R D +++ W+THL+
Sbjct: 89 WSSIAGNLPGRTDNEIKNYWNTHLR 113
>At5g16770.1 68418.m01963 myb family transcription factor (MYB9)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 336
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + G +P R D +++ W+THL+
Sbjct: 89 WSSIAGNLPGRTDNEIKNYWNTHLR 113
>At5g10280.1 68418.m01193 myb family transcription factor (MYB92)
contains PFAM profile myb DNA binding domain PF00249;
identical to cDNA putative transcription factor (MYB92)
GI:3941523
Length = 334
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
W + ++P R D +++ W+THLK +I
Sbjct: 89 WSTIANQLPGRTDNEIKNFWNTHLKKKLI 117
>At4g31120.2 68417.m04418 Skb1 methyltransferase family protein
contains Pfam profile: PF05185 Skb1 methyltransferase
Length = 584
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +2
Query: 101 TQYQRHRSKSTGSWLVVEGKVP-LRMD----LKVEFEWSTHLKL 217
+Q+ H SW+ ++ + LRMD LK E W+THL L
Sbjct: 79 SQWSSHVVGKISSWIDLDSEDEVLRMDSETTLKQEIAWATHLSL 122
>At4g31120.1 68417.m04417 Skb1 methyltransferase family protein
contains Pfam profile: PF05185 Skb1 methyltransferase
Length = 642
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +2
Query: 101 TQYQRHRSKSTGSWLVVEGKVP-LRMD----LKVEFEWSTHLKL 217
+Q+ H SW+ ++ + LRMD LK E W+THL L
Sbjct: 79 SQWSSHVVGKISSWIDLDSEDEVLRMDSETTLKQEIAWATHLSL 122
>At3g61250.1 68416.m06855 myb family transcription factor (MYB17)
contains PFAM profile: Myb-like DNA-binding domain
PF00249
Length = 299
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + ++P R D +++ W+THLK
Sbjct: 89 WAAIAAQLPGRTDNEIKNLWNTHLK 113
>At2g16720.1 68415.m01918 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 269
Score = 27.1 bits (57), Expect = 6.9
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W ++ ++P R D +++ W+TH+K
Sbjct: 89 WSLIAARLPGRTDNEIKNYWNTHIK 113
>At1g16490.1 68414.m01972 myb family transcription factor (MYB58)
contains PFAM profile: myb DNA binding domain PF00249
Length = 274
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + K+P R D +++ W THLK
Sbjct: 91 WSKIASKLPGRTDNEIKNVWHTHLK 115
>At5g65230.1 68418.m08206 myb family transcription factor (MYB53)
contains PFAM profile: myb DNA binding domain PF00249
Length = 310
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
W ++ +P R D +++ W+THLK +I
Sbjct: 89 WSMIASHLPGRTDNEIKNFWNTHLKKKLI 117
>At5g62470.2 68418.m07840 myb family transcription factor (MYB96)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 352
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 80 GN*VCHRTQYQRHRSKSTGS-WLVVEGKVPLRMDLKVEFEWSTHLK 214
GN H + H G+ W + +P R D ++ W+THLK
Sbjct: 68 GNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLK 113
>At5g62470.1 68418.m07839 myb family transcription factor (MYB96)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 351
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 80 GN*VCHRTQYQRHRSKSTGS-WLVVEGKVPLRMDLKVEFEWSTHLK 214
GN H + H G+ W + +P R D ++ W+THLK
Sbjct: 67 GNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLK 112
>At5g52490.1 68418.m06512 fibrillarin, putative similar to
fibrillarin from {Xenopus laevis} SP|P22232, {Mus
musculus} SP|P35550, {Homo sapiens} SP|P22087
Length = 292
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 148 GRGKGTFKNGLKGGVRMVNTP-EVAGDIAGKMLKQLLVTK 264
GR K G+KGG +++ TP AG K LVTK
Sbjct: 43 GRVKSESDGGIKGGSKVLVTPHRHAGVFVAKSKADALVTK 82
>At5g40330.1 68418.m04893 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 219
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHL 211
W ++ +VP R D +V+ W+THL
Sbjct: 89 WSLIAKRVPGRTDNQVKNYWNTHL 112
>At5g14750.1 68418.m01731 myb family transcription factor (MYB66) /
werewolf (WER) contains PFAM profile: Myb DNA binding
domain PF00249; identical to cDNA putative
transcription factor (MYB66) mRNA, partial cds
GI:3941491; identical to GP:9755743 myb transcription
factor werewolf (WER)/ MYB66 {Arabidopsis thaliana}
Length = 203
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHL 211
W ++ +VP R D +V+ W+THL
Sbjct: 93 WSLIAKRVPGRTDNQVKNYWNTHL 116
>At4g22680.1 68417.m03273 myb family transcription factor (MYB85)
similar to myb DNA-binding protein GI:1020155 from
[Arabidopsis thaliana]
Length = 266
Score = 26.6 bits (56), Expect = 9.1
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLK 214
W + ++P R D +++ W+TH+K
Sbjct: 89 WSKIASRLPGRTDNEIKNHWNTHIK 113
>At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-glucan
synthase, putative similar to callose synthase 1
catalytic subunit GI:13649388 from [Arabidopsis thaliana]
Length = 1768
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 281 DEFATWSWSQRGSSHAGNTTWQL*WN 358
D+F W WS+ G + +W WN
Sbjct: 1544 DDFIAWLWSRGGLFTKADQSWFTWWN 1569
>At3g27920.1 68416.m03483 trichome differentiation protein /
GLABROUS1 protein (GL1) identical to trichome
differentiation protein GL1 SP:P27900 from [Arabidopsis
thaliana]; contains Pfam profile: PF00249 Myb-like
DNA-binding domain
Length = 228
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHL 211
W ++ +VP R D +V+ W+THL
Sbjct: 91 WSLIAKRVPGRTDNQVKNYWNTHL 114
>At3g01140.1 68416.m00018 myb family transcription factor (MYB106)
similar to transforming protein (myb) homolog GB:S26605
from [Petunia x hybrida]
Length = 345
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 140 WLVVEGKVPLRMDLKVEFEWSTHLKLLVI 226
W + +P R D +++ W+THLK +I
Sbjct: 89 WSAIATHLPKRTDNEIKNYWNTHLKKRLI 117
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 333 ILRGNYDGTQFQWSSHHCFIS 395
ILRG+ + +FQ++S HC S
Sbjct: 53 ILRGDVEQDEFQYASSHCLSS 73
>At1g66610.1 68414.m07569 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 366
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 348 NCHVVFPAWELPL--CDHDHVANSSCC 274
+C + A +P+ CD H+A SSCC
Sbjct: 55 DCPICCNALTIPIFQCDKGHIACSSCC 81
>At1g63980.1 68414.m07247 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 391
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 148 GRGKGTFKNGLKGGVRMVNTPEVAG 222
G G G K G+KG VR+ N + +G
Sbjct: 31 GEGLGKDKQGIKGYVRVTNKQDTSG 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,063,637
Number of Sequences: 28952
Number of extensions: 240104
Number of successful extensions: 839
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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