Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0614
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.38 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   0.87 
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    23   2.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 370  DLPSIAPRTAPLSPGRTYDPEKLRAACMLCSNPCCRNPR 254
            D PS++P T+P  P  T+     R +    S+     PR
Sbjct: 909  DKPSVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPR 947



 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +1

Query: 13   GTRDTSNSH*RIAPKTSARKHVETEQKFICRGFSWISKEEKSG 141
            G ++       ++P TS R+  ET     CR  +  +  ++SG
Sbjct: 902  GAKEEDEDKPSVSPLTSPRQPAETHAGSPCRNSASPASSDRSG 944


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 353 RDGREVPSN*RYRCTENVTLILHTESR 433
           RDGR++P N + +   N TLI+    R
Sbjct: 546 RDGRQLPINRKQKVFINGTLIIENVER 572


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 169 EDLVTTGSWLLRKTSGA 219
           +DL+TTG + L K S A
Sbjct: 71  QDLITTGGYTLPKESNA 87


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 94  FICRGFSWISKEEKSGVRGICDLHSEDLVTTGSWL 198
           F+ RG  W+S EE   V     L ++  V  G W+
Sbjct: 377 FLTRGDLWLSWEEGMKVFEELLLDADWSVNAGMWM 411


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 212 DVFRSSQEPVVTRSSLCKSQMPRTPLFSSFEI 117
           ++++SS+  +  RSS   +   RTPL S  +I
Sbjct: 229 EIWQSSESSLRPRSSQKSAPGKRTPLISRAKI 260


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 312 PKNSARLVCYVQ 277
           P+   R+VCYVQ
Sbjct: 171 PREDDRVVCYVQ 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,973
Number of Sequences: 336
Number of extensions: 4143
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)