Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0614
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.9  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   3.3  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   4.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   5.8  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   5.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.7  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.7  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 351 PALLPFPRDVHTTP--KNSARLVCYVQTL 271
           P L+P P +V TTP  K++A   C + TL
Sbjct: 109 PNLIPRPAEVPTTPEHKSAASSSCSLSTL 137


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -1

Query: 365 PFHRAPHCSPFPGTYIRPRKTPRGLYVMFKPLLSQSTLIFKH-MTR 231
           PF R   C  F G    PR+  R  Y  F+ L  +    F H +TR
Sbjct: 121 PFDRVV-CGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTR 165


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 105 STYELLFRLHMLSCTRLWC 49
           +T+  +F +  + CT +WC
Sbjct: 280 TTFRWVFFVQFIQCTMIWC 298


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +1

Query: 310  RGRMYVPG-KGEQCGARWKGGPVKLTLPMHGECDVNFAYGISNGP 441
            R +   PG K ++ G    GGP   T   +G      A  +SNGP
Sbjct: 987  RKKTVSPGEKKDRGGPMAAGGPPSATAISYGLTMAGAAGSVSNGP 1031


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 364 PSIAPRTAPLSPGRT 320
           PS+AP T+ ++PG T
Sbjct: 411 PSVAPTTSTVAPGTT 425


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 94  FICRGFSWISKEEKSGVRGICDLHSEDLVTTGSWL 198
           F+ RG  WIS EE   V     L ++  V  G W+
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGMWM 398


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -1

Query: 506 CIMGLFWIITITYAIVLLMTPVGPFEIPYAKLTSHSPC 393
           C++G+ WII +  A+     P+  F   Y     H  C
Sbjct: 254 CLIGIVWIIALITAV-----PIAIFSTLYFPTDWHVQC 286


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,251
Number of Sequences: 2352
Number of extensions: 18216
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)