Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0614
(608 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107061-1|AAI07062.1| 242|Homo sapiens polycomb group ring fin... 36 0.084
AJ001019-1|CAA04477.1| 247|Homo sapiens ring finger protein pro... 36 0.084
CR457236-1|CAG33517.1| 462|Homo sapiens FLJ10815 protein. 31 3.2
BC001961-1|AAH01961.1| 462|Homo sapiens amino acid transporter ... 31 3.2
AK222932-1|BAD96652.1| 462|Homo sapiens amino acid transporter ... 31 3.2
AK001677-1|BAA91830.1| 462|Homo sapiens protein ( Homo sapiens ... 31 3.2
Z99756-1|CAI18854.1| 988|Homo sapiens protein ( Human DNA seque... 30 7.3
Z82214-3|CAI21674.1| 988|Homo sapiens protein ( Human DNA seque... 30 7.3
BT007406-1|AAP36074.1| 148|Homo sapiens ring finger protein 24 ... 30 7.3
BC039584-1|AAH39584.1| 148|Homo sapiens RNF24 protein protein. 30 7.3
BC000213-1|AAH00213.1| 148|Homo sapiens RNF24 protein protein. 30 7.3
AL096778-1|CAB46627.1| 148|Homo sapiens hypothetical protein pr... 30 7.3
AL079313-1|CAB45279.1| 104|Homo sapiens hypothetical protein, s... 30 7.3
AL031670-4|CAB43182.1| 148|Homo sapiens ring finger protein 24 ... 30 7.3
D13969-1|BAA03074.1| 344|Homo sapiens Mel-18 protein protein. 29 9.7
BC139832-1|AAI39833.1| 658|Homo sapiens JPH1 protein protein. 29 9.7
BC114464-1|AAI14465.1| 658|Homo sapiens JPH1 protein protein. 29 9.7
BC113856-1|AAI13857.1| 658|Homo sapiens JPH1 protein protein. 29 9.7
BC098299-1|AAH98299.1| 658|Homo sapiens JPH1 protein protein. 29 9.7
BC049372-1|AAH49372.1| 556|Homo sapiens JPH1 protein protein. 29 9.7
BC024255-1|AAH24255.1| 344|Homo sapiens polycomb group ring fin... 29 9.7
BC010235-1|AAH10235.1| 352|Homo sapiens polycomb group ring fin... 29 9.7
BC007602-1|AAH07602.1| 277|Homo sapiens polycomb group ring fin... 29 9.7
BC004858-1|AAH04858.1| 344|Homo sapiens polycomb group ring fin... 29 9.7
BC003168-1|AAH03168.2| 764|Homo sapiens oxysterol binding prote... 29 9.7
AL591408-3|CAI16745.1| 350|Homo sapiens polycomb group ring fin... 29 9.7
AL591408-2|CAI16746.1| 275|Homo sapiens polycomb group ring fin... 29 9.7
AK128830-1|BAC87630.1| 455|Homo sapiens protein ( Homo sapiens ... 29 9.7
AK027885-1|BAB55431.1| 220|Homo sapiens protein ( Homo sapiens ... 29 9.7
AK000370-1|BAA91118.1| 591|Homo sapiens protein ( Homo sapiens ... 29 9.7
AF392451-1|AAL40664.1| 764|Homo sapiens oxysterol-binding prote... 29 9.7
AB209872-1|BAD93109.1| 537|Homo sapiens oxysterol-binding prote... 29 9.7
AB047006-1|BAB40779.1| 352|Homo sapiens hMBLR protein. 29 9.7
AB042635-1|BAB11986.1| 241|Homo sapiens junctophilin type1 prot... 29 9.7
>BC107061-1|AAI07062.1| 242|Homo sapiens polycomb group ring finger
3 protein.
Length = 242
Score = 36.3 bits (80), Expect = 0.084
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 148 LELHFSLPSRSN*ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
+ H + S ++D T H F S LV++ N+TCP+CRI
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRI 57
>AJ001019-1|CAA04477.1| 247|Homo sapiens ring finger protein
protein.
Length = 247
Score = 36.3 bits (80), Expect = 0.084
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 148 LELHFSLPSRSN*ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
+ H + S ++D T H F S LV++ N+TCP+CRI
Sbjct: 16 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRI 62
>CR457236-1|CAG33517.1| 462|Homo sapiens FLJ10815 protein.
Length = 462
Score = 31.1 bits (67), Expect = 3.2
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 56 RRVQESMWRRNKSSYVEDLVGSRRKRKVEFEAFATCTVKILLLLVLGCFGKRQVQPIIGG 235
R V E +W R + VE+ VG R+R+V + + +LL L + GK V +IGG
Sbjct: 344 RAVVEGLWLRYQGVPVEEDVGRERRRRV-LQTLVWFLLTLLLALFIPDIGK--VISVIGG 400
>BC001961-1|AAH01961.1| 462|Homo sapiens amino acid transporter
protein.
Length = 462
Score = 31.1 bits (67), Expect = 3.2
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 56 RRVQESMWRRNKSSYVEDLVGSRRKRKVEFEAFATCTVKILLLLVLGCFGKRQVQPIIGG 235
R V E +W R + VE+ VG R+R+V + + +LL L + GK V +IGG
Sbjct: 344 RAVVEGLWLRYQGVPVEEDVGRERRRRV-LQTLVWFLLTLLLALFIPDIGK--VISVIGG 400
>AK222932-1|BAD96652.1| 462|Homo sapiens amino acid transporter
variant protein.
Length = 462
Score = 31.1 bits (67), Expect = 3.2
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 56 RRVQESMWRRNKSSYVEDLVGSRRKRKVEFEAFATCTVKILLLLVLGCFGKRQVQPIIGG 235
R V E +W R + VE+ VG R+R+V + + +LL L + GK V +IGG
Sbjct: 344 RAVVEGLWLRYQGVPVEEDVGRERRRRV-LQTLVWFLLTLLLALFIPDIGK--VISVIGG 400
>AK001677-1|BAA91830.1| 462|Homo sapiens protein ( Homo sapiens
cDNA FLJ10815 fis, clone NT2RP4000989, weakly similar to
UNC-47 PROTEIN. ).
Length = 462
Score = 31.1 bits (67), Expect = 3.2
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 56 RRVQESMWRRNKSSYVEDLVGSRRKRKVEFEAFATCTVKILLLLVLGCFGKRQVQPIIGG 235
R V E +W R + VE+ VG R+R+V + + +LL L + GK V +IGG
Sbjct: 344 RAVVEGLWLRYQGVPVEEDVGRERRRRV-LQTLVWFLLTLLLALFIPDIGK--VISVIGG 400
>Z99756-1|CAI18854.1| 988|Homo sapiens protein ( Human DNA sequence
from clone RP1-100N22 on chromosome 22q13.31-13.33. ).
Length = 988
Score = 29.9 bits (64), Expect = 7.3
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 561 GCARSRRTSHTNPSVSCRLYYGIVLDHNHYVRHCSINDTG--RSIRDSVCKINVTFSVHR 388
GC S + T P+ C Y + D + C++N+ G R+ +D+ + + V
Sbjct: 212 GCQHSCEDTDTGPTCGCHQKYALHSDGRTCIETCAVNNGGCDRTCKDTATGVRCSCPVGF 271
Query: 387 *RQFDG 370
Q DG
Sbjct: 272 TLQPDG 277
>Z82214-3|CAI21674.1| 988|Homo sapiens protein ( Human DNA sequence
from clone RP3-526I14 on chromosome 22. ).
Length = 988
Score = 29.9 bits (64), Expect = 7.3
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 561 GCARSRRTSHTNPSVSCRLYYGIVLDHNHYVRHCSINDTG--RSIRDSVCKINVTFSVHR 388
GC S + T P+ C Y + D + C++N+ G R+ +D+ + + V
Sbjct: 212 GCQHSCEDTDTGPTCGCHQKYALHSDGRTCIETCAVNNGGCDRTCKDTATGVRCSCPVGF 271
Query: 387 *RQFDG 370
Q DG
Sbjct: 272 TLQPDG 277
>BT007406-1|AAP36074.1| 148|Homo sapiens ring finger protein 24
protein.
Length = 148
Score = 29.9 bits (64), Expect = 7.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 85 PSPHAFLHSSLVRFFSVNSTCPSCRIP 5
P HAF L+++ V CP C +P
Sbjct: 95 PCKHAFHRKCLIKWLEVRKVCPLCNMP 121
>BC039584-1|AAH39584.1| 148|Homo sapiens RNF24 protein protein.
Length = 148
Score = 29.9 bits (64), Expect = 7.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 85 PSPHAFLHSSLVRFFSVNSTCPSCRIP 5
P HAF L+++ V CP C +P
Sbjct: 95 PCKHAFHRKCLIKWLEVRKVCPLCNMP 121
>BC000213-1|AAH00213.1| 148|Homo sapiens RNF24 protein protein.
Length = 148
Score = 29.9 bits (64), Expect = 7.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 85 PSPHAFLHSSLVRFFSVNSTCPSCRIP 5
P HAF L+++ V CP C +P
Sbjct: 95 PCKHAFHRKCLIKWLEVRKVCPLCNMP 121
>AL096778-1|CAB46627.1| 148|Homo sapiens hypothetical protein
protein.
Length = 148
Score = 29.9 bits (64), Expect = 7.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 85 PSPHAFLHSSLVRFFSVNSTCPSCRIP 5
P HAF L+++ V CP C +P
Sbjct: 95 PCKHAFHRKCLIKWLEVRKVCPLCNMP 121
>AL079313-1|CAB45279.1| 104|Homo sapiens hypothetical protein,
similar to (M97204) goliath.5 homolog [Drosophila
melanog protein.
Length = 104
Score = 29.9 bits (64), Expect = 7.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 85 PSPHAFLHSSLVRFFSVNSTCPSCRIP 5
P HAF L+++ V CP C +P
Sbjct: 51 PCKHAFHRKCLIKWLEVRKVCPLCNMP 77
>AL031670-4|CAB43182.1| 148|Homo sapiens ring finger protein 24
protein.
Length = 148
Score = 29.9 bits (64), Expect = 7.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 85 PSPHAFLHSSLVRFFSVNSTCPSCRIP 5
P HAF L+++ V CP C +P
Sbjct: 95 PCKHAFHRKCLIKWLEVRKVCPLCNMP 121
>D13969-1|BAA03074.1| 344|Homo sapiens Mel-18 protein protein.
Length = 344
Score = 29.5 bits (63), Expect = 9.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 106 LDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
+D T V H+F + +VR+ N CP C +
Sbjct: 26 IDATTIVECLHSFCKTCIVRYLETNKYCPMCDV 58
>BC139832-1|AAI39833.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.5 bits (63), Expect = 9.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PRGVFRGRMYVPGKGE-QCGARWKGGPVKLTLPMHGECDVNFAYGISNGPTGVINRTMA 468
P+ + GR ++P + +++ G VKL P H DV G S + ++++ A
Sbjct: 528 PQSKYSGRHHIPNPSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSALVHKPSA 586
>BC114464-1|AAI14465.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.5 bits (63), Expect = 9.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PRGVFRGRMYVPGKGE-QCGARWKGGPVKLTLPMHGECDVNFAYGISNGPTGVINRTMA 468
P+ + GR ++P + +++ G VKL P H DV G S + ++++ A
Sbjct: 528 PQSKYSGRHHIPNPSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSALVHKPSA 586
>BC113856-1|AAI13857.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.5 bits (63), Expect = 9.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PRGVFRGRMYVPGKGE-QCGARWKGGPVKLTLPMHGECDVNFAYGISNGPTGVINRTMA 468
P+ + GR ++P + +++ G VKL P H DV G S + ++++ A
Sbjct: 528 PQSKYSGRHHIPNPSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSALVHKPSA 586
>BC098299-1|AAH98299.1| 658|Homo sapiens JPH1 protein protein.
Length = 658
Score = 29.5 bits (63), Expect = 9.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PRGVFRGRMYVPGKGE-QCGARWKGGPVKLTLPMHGECDVNFAYGISNGPTGVINRTMA 468
P+ + GR ++P + +++ G VKL P H DV G S + ++++ A
Sbjct: 528 PQSKYSGRHHIPNPSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSALVHKPSA 586
>BC049372-1|AAH49372.1| 556|Homo sapiens JPH1 protein protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PRGVFRGRMYVPGKGE-QCGARWKGGPVKLTLPMHGECDVNFAYGISNGPTGVINRTMA 468
P+ + GR ++P + +++ G VKL P H DV G S + ++++ A
Sbjct: 423 PQSKYSGRHHIPNPSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSALVHKPSA 481
>BC024255-1|AAH24255.1| 344|Homo sapiens polycomb group ring finger
2 protein.
Length = 344
Score = 29.5 bits (63), Expect = 9.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 106 LDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
+D T V H+F + +VR+ N CP C +
Sbjct: 26 IDATTIVECLHSFCKTCIVRYLETNKYCPMCDV 58
>BC010235-1|AAH10235.1| 352|Homo sapiens polycomb group ring finger
6 protein.
Length = 352
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 109 ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
++D T H F S +VR F ++ CP C I
Sbjct: 143 LIDATTITECLHTFCKSCIVRHFYYSNRCPKCNI 176
>BC007602-1|AAH07602.1| 277|Homo sapiens polycomb group ring finger
6 protein.
Length = 277
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 109 ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
++D T H F S +VR F ++ CP C I
Sbjct: 143 LIDATTITECLHTFCKSCIVRHFYYSNRCPKCNI 176
>BC004858-1|AAH04858.1| 344|Homo sapiens polycomb group ring finger
2 protein.
Length = 344
Score = 29.5 bits (63), Expect = 9.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 106 LDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
+D T V H+F + +VR+ N CP C +
Sbjct: 26 IDATTIVECLHSFCKTCIVRYLETNKYCPMCDV 58
>BC003168-1|AAH03168.2| 764|Homo sapiens oxysterol binding
protein-like 10 protein.
Length = 764
Score = 29.5 bits (63), Expect = 9.7
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 ISVDCDNKGLNITYKPRGVFRGRMYVPGKGEQCGARWKGGPVK-LTLPMHGECDVNFAYG 426
+S++C G + T +F + + GK + A K P + HGE + +
Sbjct: 611 VSINCAKTGYSATV----IFHTKPFYGGKVHRVTAEVKHNPTNTIVCKAHGEWNGTLEFT 666
Query: 427 ISNGPTGVINRT 462
+NG T VI+ T
Sbjct: 667 YNNGETKVIDTT 678
>AL591408-3|CAI16745.1| 350|Homo sapiens polycomb group ring finger
6 protein.
Length = 350
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 109 ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
++D T H F S +VR F ++ CP C I
Sbjct: 141 LIDATTITECLHTFCKSCIVRHFYYSNRCPKCNI 174
>AL591408-2|CAI16746.1| 275|Homo sapiens polycomb group ring finger
6 protein.
Length = 275
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 109 ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
++D T H F S +VR F ++ CP C I
Sbjct: 141 LIDATTITECLHTFCKSCIVRHFYYSNRCPKCNI 174
>AK128830-1|BAC87630.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ46317 fis, clone TESTI4041832. ).
Length = 455
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 310 RGRMYVPGKGEQCGARWKGGPVKLTLPMHG 399
RG + PG+ +CG RW+ G V +L G
Sbjct: 405 RGSVASPGEKGECGVRWREGRVWYSLDRRG 434
>AK027885-1|BAB55431.1| 220|Homo sapiens protein ( Homo sapiens
cDNA FLJ14979 fis, clone Y79AA1000037, moderately
similar to DNA-BINDING PROTEIN BMI-1. ).
Length = 220
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 109 ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
++D T H F S +VR F ++ CP C I
Sbjct: 143 LIDATTITECLHTFCKSCIVRHFYYSNRCPKCNI 176
>AK000370-1|BAA91118.1| 591|Homo sapiens protein ( Homo sapiens
cDNA FLJ20363 fis, clone HEP17001. ).
Length = 591
Score = 29.5 bits (63), Expect = 9.7
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 ISVDCDNKGLNITYKPRGVFRGRMYVPGKGEQCGARWKGGPVK-LTLPMHGECDVNFAYG 426
+S++C G + T +F + + GK + A K P + HGE + +
Sbjct: 438 VSINCAKTGYSATV----IFHTKPFYGGKVHRVTAEVKHNPTNTIVCKAHGEWNGTLEFT 493
Query: 427 ISNGPTGVINRT 462
+NG T VI+ T
Sbjct: 494 YNNGETKVIDTT 505
>AF392451-1|AAL40664.1| 764|Homo sapiens oxysterol-binding
protein-like protein OSBPL10 protein.
Length = 764
Score = 29.5 bits (63), Expect = 9.7
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 ISVDCDNKGLNITYKPRGVFRGRMYVPGKGEQCGARWKGGPVK-LTLPMHGECDVNFAYG 426
+S++C G + T +F + + GK + A K P + HGE + +
Sbjct: 611 VSINCAKTGYSATV----IFHTKPFYGGKVHRVTAEVKHNPTNTIVCKAHGEWNGTLEFT 666
Query: 427 ISNGPTGVINRT 462
+NG T VI+ T
Sbjct: 667 YNNGETKVIDTT 678
>AB209872-1|BAD93109.1| 537|Homo sapiens oxysterol-binding
protein-like protein 10 variant protein.
Length = 537
Score = 29.5 bits (63), Expect = 9.7
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 ISVDCDNKGLNITYKPRGVFRGRMYVPGKGEQCGARWKGGPVK-LTLPMHGECDVNFAYG 426
+S++C G + T +F + + GK + A K P + HGE + +
Sbjct: 379 VSINCAKTGYSATV----IFHTKPFYGGKVHRVTAEVKHNPTNTIVCKAHGEWNGTLEFT 434
Query: 427 ISNGPTGVINRT 462
+NG T VI+ T
Sbjct: 435 YNNGETKVIDTT 446
>AB047006-1|BAB40779.1| 352|Homo sapiens hMBLR protein.
Length = 352
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 109 ILDI*TFVPSPHAFLHSSLVRFFSVNSTCPSCRI 8
++D T H F S +VR F ++ CP C I
Sbjct: 143 LIDATTITECLHTFCKSCIVRHFYYSNRCPKCNI 176
>AB042635-1|BAB11986.1| 241|Homo sapiens junctophilin type1
protein.
Length = 241
Score = 29.5 bits (63), Expect = 9.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 PRGVFRGRMYVPGKGE-QCGARWKGGPVKLTLPMHGECDVNFAYGISNGPTGVINRTMA 468
P+ + GR ++P + +++ G VKL P H DV G S + ++++ A
Sbjct: 108 PQSKYSGRHHIPNPSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSALVHKPSA 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,779,034
Number of Sequences: 237096
Number of extensions: 2668329
Number of successful extensions: 10538
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 10062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10536
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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