Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0614
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49071-5|CAA88879.1|  609|Caenorhabditis elegans Hypothetical pr...    41   6e-04
Z49125-1|CAA88934.1|  424|Caenorhabditis elegans Hypothetical pr...    34   0.069
Z78542-9|CAB01742.2|  405|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z68297-2|CAA92594.3|  522|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z50044-3|CAA90355.1|  389|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U42439-5|AAA83509.2|  542|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U80446-6|AAB37805.2|  783|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF045641-5|AAC02577.2|  554|Caenorhabditis elegans Hypothetical ...    28   4.5  
Z81059-4|CAB02928.2|  228|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z49071-5|CAA88879.1|  609|Caenorhabditis elegans Hypothetical
           protein T22C8.7 protein.
          Length = 609

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
 Frame = +1

Query: 256 VDCDNKGLNITYKPRGVFRGRMYVPGKGEQ--CG----ARWKGGPVKLTLPMHGECDVNF 417
           ++C ++G+ +   P G F G +YV G   Q  C      R    P+ + LP  G C+V  
Sbjct: 36  LECGSEGIRLHINPTGTFGGHVYVRGFFPQTVCHLNYCTRLTNRPIVMDLPFRGPCNVRR 95

Query: 418 AYGISNGPTGVINRTMAY-VMVMIQNNPIIQTAGDRWVRVGC 540
              ++  P  +     +Y V V+IQ++P+  T+ D+  R+ C
Sbjct: 96  RRNVA--PPSI-----SYDVTVIIQHHPLFVTSFDKAYRLNC 130


>Z49125-1|CAA88934.1|  424|Caenorhabditis elegans Hypothetical
           protein C47G2.1 protein.
          Length = 424

 Score = 34.3 bits (75), Expect = 0.069
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 256 VDCDNKGLNITYKPRGVFRGRMYVPGKGEQCGARW-KGGPVKLTLPMHGECDVNFAYGIS 432
           V+C    + + +  R  F G +YV G  +Q G R  +GG     + +  +   N A   S
Sbjct: 31  VECGPNSITVNFNTRNPFEGHVYVKGLYDQAGCRSDEGGRQVAGIELPFD-SCNTARTRS 89

Query: 433 NGPTGVINRTMAYVMVMIQNNPIIQTAGDRWVRVGC 540
             P GV   T     V+I  +P   T  DR  R+ C
Sbjct: 90  LNPKGVFVST----TVVISFHPQFVTKVDRAYRIQC 121


>Z78542-9|CAB01742.2|  405|Caenorhabditis elegans Hypothetical
           protein F20D1.8 protein.
          Length = 405

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
 Frame = +1

Query: 256 VDCDNKGLNITYKPRGVFRGRMYVPGKGEQCGARWKG---GPVKLTLPMHGECDVNFAYG 426
           + C ++ L+I +K +G F G +YV G       R        V LT+  +  CDV     
Sbjct: 32  IRCGSESLSINFKTQGAFEGHVYVKGHYSMKHCRTDATLESQVNLTV-SYSACDV--IRQ 88

Query: 427 ISNGPTGVINRTMAYVMVMIQNNPIIQTAGDRWVRVGC 540
            S+ P G+    M    ++I  +P+  T  D+  +V C
Sbjct: 89  RSSNPKGI----MMTATIIISFHPMFITKIDKSYKVQC 122


>Z68297-2|CAA92594.3|  522|Caenorhabditis elegans Hypothetical
           protein F11A10.3 protein.
          Length = 522

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 109 ILDI*TFVPSPHAFLHSSLVRFF-SVNSTCPSC 14
           I+D  T +   H F  S L+ +F S N+TCP+C
Sbjct: 309 IVDATTIIDCMHTFCKSCLLTYFESDNNTCPTC 341


>Z50044-3|CAA90355.1|  389|Caenorhabditis elegans Hypothetical
           protein F22B5.3 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = +1

Query: 256 VDCDNKGLNITYKPRGVFRGRMYVPGKGEQCGAR-WKGGPVKLTLPMHGECDVNFAYGIS 432
           V+C    + + +  R  F G +YV G  +Q   R  +GG     + +  +   N A   S
Sbjct: 32  VECGPTSITVNFNTRNAFEGHVYVKGLFDQQECRNDEGGRQVAGIELPFD-TCNVARTRS 90

Query: 433 NGPTGVINRTMAYVMVMIQNNPIIQTAGDRWVRVGC 540
             P GV   T     V++  +P   T  DR  RV C
Sbjct: 91  LNPKGVFVTT----TVVVSFHPQFVTKVDRAYRVQC 122


>Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical
           protein F21G4.1 protein.
          Length = 640

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 471 RNGYDPEQSHNTDGRRQMGSCGMFAWTSHN-HT 566
           +  Y  E S +T+GRR++ S G   W  H+ HT
Sbjct: 121 KEAYSVEMSCDTNGRREISSQGEDCWREHHEHT 153


>U42439-5|AAA83509.2|  542|Caenorhabditis elegans Hypothetical
           protein F19C7.4 protein.
          Length = 542

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 454 NRTMAYVMVMIQNNPII-QTAGDRWVR 531
           N+T  YV +MI     I +T GDRW+R
Sbjct: 81  NKTTGYVFLMIGGESSINKTNGDRWIR 107


>U80446-6|AAB37805.2|  783|Caenorhabditis elegans Hypothetical
           protein F56A3.1 protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +2

Query: 56  RRVQESMWRRNKSSYVEDLVGSRRKRKVEFEAFATCTVKILLL 184
           + V++ +W   K+   +  +    K+K+E   F TCT K+L++
Sbjct: 366 KSVKKLIWTCWKTLKQQSKLPEIEKKKLEISEFLTCTYKLLII 408


>AF045641-5|AAC02577.2|  554|Caenorhabditis elegans Hypothetical
           protein F53H1.3 protein.
          Length = 554

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 317 RPRKTPRGLYVMFKPLLSQSTLIFKHMTR 231
           R   TP GLY  +KP LS+   + K + R
Sbjct: 340 RTLDTPAGLYTQYKPFLSKDKSLAKKLLR 368


>Z81059-4|CAB02928.2|  228|Caenorhabditis elegans Hypothetical
           protein F11F1.6 protein.
          Length = 228

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 448 VINRTMAYVMVMIQNNPIIQTAGDRWVRVGCSPGPRTTTHVDATLAVTDNG 600
           V+    +YV+    +N +I T GD+W+R           ++     VTD+G
Sbjct: 9   VLCTVYSYVISQCDDNGVIYTNGDKWIRNNHFLVTCRDGNIQTLKCVTDSG 59


>Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical
           protein F59F3.2 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 23  TRRIHTEESHQRRVQESMWRRNKSSYVE-DLVGSRRKRKVEFEAFATCTV 169
           T  +H E+ H R  +++ WR+ +  +   +  G+RRK + E      CTV
Sbjct: 64  TELLHVEDEHIRTSRQA-WRKQQQRWRSGNGSGNRRKTQFEEPKICDCTV 112


>Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical
           protein C02C6.2b protein.
          Length = 554

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 222 GCT*RFPKQPRTSSNKIFTVQVANASNSTFLFLRDP 115
           G T   P++   S N I+   +A  S+S FLF+ DP
Sbjct: 102 GITYYDPQRSFWSENMIYEESIAKESSSLFLFVIDP 137


>Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical
           protein C02C6.2a protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 222 GCT*RFPKQPRTSSNKIFTVQVANASNSTFLFLRDP 115
           G T   P++   S N I+   +A  S+S FLF+ DP
Sbjct: 109 GITYYDPQRSFWSENMIYEESIAKESSSLFLFVIDP 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,607,980
Number of Sequences: 27780
Number of extensions: 400178
Number of successful extensions: 1186
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)