Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0614
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    24   1.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   1.8  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   1.8  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   1.8  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   1.8  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   4.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.4  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 522 SVSCRLYYGIVLDHNHYVRHCSINDTGRSIRD 427
           S+SC L    +  H+++++ CS+ND   +I +
Sbjct: 118 SLSCWLQ---MTKHHNFIKVCSVNDVNMTITE 146


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 94  FICRGFSWISKEEKSGVRGICDLHSEDLVTTGSWL 198
           F+ RG  WIS EE   V     L ++  V  G W+
Sbjct: 381 FLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWM 415


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -3

Query: 285 YVQTLVVAIHAYIQTYDPPIIGCT*RFPKQPRTSSNKIFTVQVANASNST 136
           + QTL  AI A+++     + G   R P+Q   + NKI   + AN +++T
Sbjct: 84  WYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNKI--PEGANTTSTT 131


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -3

Query: 285 YVQTLVVAIHAYIQTYDPPIIGCT*RFPKQPRTSSNKIFTVQVANASNST 136
           + QTL  AI A+++     + G   R P+Q   + NKI   + AN +++T
Sbjct: 84  WYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNKI--PEGANTTSTT 131


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -3

Query: 285 YVQTLVVAIHAYIQTYDPPIIGCT*RFPKQPRTSSNKIFTVQVANASNST 136
           + QTL  AI A+++     + G   R P+Q   + NKI   + AN +++T
Sbjct: 84  WYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNKI--PEGANTTSTT 131


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 87  FRLHMLSCTRLW 52
           +R+H  SC RLW
Sbjct: 131 YRIHADSCDRLW 142


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 167 VKILLLLVLGC 199
           +K+LLL+VLGC
Sbjct: 1   MKLLLLIVLGC 11


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 314  VVCTSRGKGSSAGRD 358
            V+C  RGKG  + +D
Sbjct: 1604 VICVLRGKGHGSDKD 1618


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 512 AVCIMGLFWIITITYAIVLLMTPVGPFEIPY 420
           AV  + L++ +T T+        VGP  +P+
Sbjct: 12  AVLFLALYYYLTSTFDFWKSRGVVGPKPVPF 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,517
Number of Sequences: 438
Number of extensions: 5379
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)