Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0610
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 70  LLHIWSLSCLLFISTRAEDEQ 132
           L H+W LS L  +  R+ DE+
Sbjct: 10  LKHVWFLSKLFLLCPRSIDEK 30


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 536 YCHIDI**CFLNVCE 492
           YCH +I  C +N CE
Sbjct: 64  YCHENINDCKVNPCE 78


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -2

Query: 469 FDDACRISLNLIVVRTFSFYFQNRPTCRINVHS 371
           +D +   SL  + +  ++ YF+    C  N H+
Sbjct: 315 YDASITASLGRVPIWPYTLYFRMPHKCNGNAHN 347


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -2

Query: 469 FDDACRISLNLIVVRTFSFYFQNRPTCRINVHS 371
           +D +   SL  + +  ++ YF+    C  N H+
Sbjct: 322 YDASITASLGRVPIWPYTLYFRMPHKCNGNAHN 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,009
Number of Sequences: 336
Number of extensions: 2831
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)