Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0610
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   7.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.8  

>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 406 QNRPTCRINVHSKISTGDSFRDH 338
           Q  P C I   S I  G+  +DH
Sbjct: 291 QQIPNCIIEERSNIDRGECLKDH 313


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +1

Query: 46   HYY*IPKHLLHIWSLSCLLFIST---RAEDEQDSES--SGRLMAANEN 174
            H+  I KH+ HIW+     ++ST   RA+  +++ S   GRL+   E+
Sbjct: 1629 HWRLIQKHMQHIWNRWHREYLSTLQKRAKWNKNAISIEPGRLVILQED 1676


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 295  CFLRIKYCGCVVTVLLTSFHLSRKKRQDS 209
            C+ R+++ G  +   L + HL   +RQ S
Sbjct: 2016 CYQRLEFLGDAILDYLITRHLYEDRRQHS 2044


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,993
Number of Sequences: 2352
Number of extensions: 11518
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)