Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0610
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p pro...   134   9e-32
AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC...   134   9e-32
AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB...   134   9e-32
AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA...   134   9e-32
U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.       111   9e-25
BT001587-1|AAN71342.1| 1162|Drosophila melanogaster RE26442p pro...    29   6.3  

>BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p
           protein.
          Length = 658

 Score =  134 bits (324), Expect = 9e-32
 Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
 Frame = +2

Query: 134 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 313
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 314 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILEIETEGSYHDEIQAYAAGIVEGALTWYLI 493
           W Q NDL  IP GV R  ++  +   GW+ +E+ET+ +Y D +QAYAAG++EG+LTW  I
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNI 120

Query: 494 HTHLENTIRYQCD-NTPIEKQCNKLRDALT 580
           +    NTI   C+ +   +K C  LRD LT
Sbjct: 121 YNQWSNTISSSCERDESTQKFCGWLRDLLT 150


>AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC,
           isoform C protein.
          Length = 658

 Score =  134 bits (324), Expect = 9e-32
 Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
 Frame = +2

Query: 134 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 313
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 314 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILEIETEGSYHDEIQAYAAGIVEGALTWYLI 493
           W Q NDL  IP GV R  ++  +   GW+ +E+ET+ +Y D +QAYAAG++EG+LTW  I
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNI 120

Query: 494 HTHLENTIRYQCD-NTPIEKQCNKLRDALT 580
           +    NTI   C+ +   +K C  LRD LT
Sbjct: 121 YNQWSNTISSSCERDESTQKFCGWLRDLLT 150


>AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB,
           isoform B protein.
          Length = 658

 Score =  134 bits (324), Expect = 9e-32
 Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
 Frame = +2

Query: 134 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 313
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 314 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILEIETEGSYHDEIQAYAAGIVEGALTWYLI 493
           W Q NDL  IP GV R  ++  +   GW+ +E+ET+ +Y D +QAYAAG++EG+LTW  I
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNI 120

Query: 494 HTHLENTIRYQCD-NTPIEKQCNKLRDALT 580
           +    NTI   C+ +   +K C  LRD LT
Sbjct: 121 YNQWSNTISSSCERDESTQKFCGWLRDLLT 150


>AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA,
           isoform A protein.
          Length = 658

 Score =  134 bits (324), Expect = 9e-32
 Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
 Frame = +2

Query: 134 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 313
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 314 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILEIETEGSYHDEIQAYAAGIVEGALTWYLI 493
           W Q NDL  IP GV R  ++  +   GW+ +E+ET+ +Y D +QAYAAG++EG+LTW  I
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNI 120

Query: 494 HTHLENTIRYQCD-NTPIEKQCNKLRDALT 580
           +    NTI   C+ +   +K C  LRD LT
Sbjct: 121 YNQWSNTISSSCERDESTQKFCGWLRDLLT 150


>U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.
          Length = 624

 Score =  111 bits (266), Expect = 9e-25
 Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
 Frame = +2

Query: 236 MERSQEDGNYAATVFYSEKTGYHIEYWGQSNDLAVIPKGVARAYFRMDIDTTGWSILEIE 415
           MER + DG Y AT  ++++ G+ IE W Q NDL  IP GV R  ++  +   GW+ +E+E
Sbjct: 1   MERPEYDGTYCATALWTKQVGFQIENWKQQNDLVNIPTGVGRICYKDSVYENGWAQIEVE 60

Query: 416 TEGSYHDEIQAYAAGIVEGALTWYLIHTHLENTIRYQCD-NTPIEKQCNKLRDALT 580
           T+ +Y D +QAYAAG++EG+LTW  I+    NTI   C+ +   +K C  LRD LT
Sbjct: 61  TQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTISSSCERDESTQKFCGWLRDLLT 116


>BT001587-1|AAN71342.1| 1162|Drosophila melanogaster RE26442p
           protein.
          Length = 1162

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -2

Query: 547 LYRCIVTLISNSVF*MCVN*VPGQCPFDDACRISLNLIVVRTFSFYFQNRPTCRINVHSK 368
           L  C+  +IS S     +  +   C F     I   ++VV  F+F + N P+  +N ++K
Sbjct: 746 LTNCMTLVISMSFLFTRIPFIIKSC-FSALIMIGYAVLVVSEFNFIYANSPSTNVNFNAK 804

Query: 367 IS 362
            S
Sbjct: 805 YS 806


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,589,309
Number of Sequences: 53049
Number of extensions: 496426
Number of successful extensions: 1546
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)