Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0610
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025723-2|AAK29943.1|  581|Caenorhabditis elegans Hypothetical ...    64   5e-11
Z83104-4|CAB05478.2|  582|Caenorhabditis elegans Hypothetical pr...    60   9e-10
AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical ...    58   4e-09
U41025-3|AAA82348.1|  244|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>AC025723-2|AAK29943.1|  581|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.8 protein.
          Length = 581

 Score = 64.5 bits (150), Expect = 5e-11
 Identities = 33/80 (41%), Positives = 47/80 (58%)
 Frame = +2

Query: 353 VARAYFRMDIDTTGWSILEIETEGSYHDEIQAYAAGIVEGALTWYLIHTHLENTIRYQCD 532
           VA   +   ++TTGW ILEIET  S+  ++QAY AG+ EG LT   I+ H  NTI   C+
Sbjct: 72  VALGKYSNQVNTTGWGILEIETFASHSYDVQAYGAGVAEGELTRLQIYYHYRNTIETMCN 131

Query: 533 NTPIEKQCNKLRDALTRSLE 592
           N  +   C +L   L ++L+
Sbjct: 132 NHTL--FCKRLYIYLQQNLD 149


>Z83104-4|CAB05478.2|  582|Caenorhabditis elegans Hypothetical
           protein F09B12.3 protein.
          Length = 582

 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 30/78 (38%), Positives = 49/78 (62%)
 Frame = +2

Query: 353 VARAYFRMDIDTTGWSILEIETEGSYHDEIQAYAAGIVEGALTWYLIHTHLENTIRYQCD 532
           VA A ++  ++TTGW+ LE+ET+ +Y  ++QAY+AG +EG L+  ++  HL+N     C 
Sbjct: 81  VAVARWQNAVNTTGWTFLEVETKENYCPQLQAYSAGYLEGLLSKTVLTYHLKNAQEDYCK 140

Query: 533 NTPIEKQCNKLRDALTRS 586
           N      C++L D LT +
Sbjct: 141 N--FTGYCSRLSDFLTEN 156


>AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical
           protein Y37D8A.2 protein.
          Length = 571

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
 Frame = +2

Query: 272 TVFYSEKTGYHIEYWGQSNDLAVIPKGVARAYFRMDIDTTGWSILEIET-EGSYHDEIQA 448
           TV    +   H    G+  D  +  K +A AYF  +++ TGW+ LE++         +Q 
Sbjct: 25  TVCQKPEGDLHYFKEGRKTDEELCAKRLATAYFHDEVNQTGWAFLEVDVISPKIPHYLQG 84

Query: 449 YAAGIVEGALTWYLIHTHLENTIRYQCDNTPIEKQCNKLRDALTRSLE 592
           YAAG  EG  T +LI  H+ NT+   CD    +  C++L + +  +L+
Sbjct: 85  YAAGFAEGRATRHLIDLHIINTVNGYCDGA--KHFCDELGEFMVDNLK 130


>U41025-3|AAA82348.1|  244|Caenorhabditis elegans Hypothetical
           protein C01C4.2 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -2

Query: 364 STGDSFRDHGEVVALTPIFNVISCFLRIKYCGCVVTVLLTSFHLSR 227
           S+ D FR H  +V   P  NV+  +++ K C  V      SF ++R
Sbjct: 4   SSPDHFRPHDSLVNAAPALNVLH-YMKPKLCAYVGAYRKISFEVNR 48


>Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical protein
            F14B4.3 protein.
          Length = 1127

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -2

Query: 274  CGCVVTVLLTS---FHLSRKKRQDS*YTKYTEDVR 179
            CG +++VL++S    HL +KKR+D     YTE  R
Sbjct: 1047 CGSLLSVLMSSRAGSHLLKKKRKDDEPLDYTETQR 1081


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 257 GNYAATVFYSEKTGYHIEYWGQSNDLAVIPKGVARAYFRMDI 382
           G Y  T FY+ +  +HI   G+ ++   +P+GV RA  R  +
Sbjct: 159 GTYQGTEFYNREVNFHI---GEGSEEG-LPEGVERALRRFQL 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,940,538
Number of Sequences: 27780
Number of extensions: 267527
Number of successful extensions: 694
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)