Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0609
         (517 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-5|CAA97787.1|  427|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AC091267-3|AAK31563.3|  339|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z78199-2|CAB54275.1|  582|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF108229-2|AAF17301.1|  582|Caenorhabditis elegans VAB-8S protein.     27   8.0  
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.     27   8.0  

>Z73425-5|CAA97787.1|  427|Caenorhabditis elegans Hypothetical
           protein F12F6.9 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 330 GPVEPQNRRRRRGSTWEAGCGKYRSHGPK 416
           GP  P  RR R+G+  ++  G + S GPK
Sbjct: 165 GPSGPPGRRGRKGADGKSAMGGFGSPGPK 193


>AC091267-3|AAK31563.3|  339|Caenorhabditis elegans Hypothetical
           protein Y37B11A.3 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 205 CFVSTEAISLKTFQQKSHRHLRRDGVHDASSEERLGHI 318
           CFVST A S K + Q       +DG+H+ S   R+ HI
Sbjct: 143 CFVST-AGSFKQWLQAPSDDKGQDGIHNFSITARIMHI 179


>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
           protein K12F2.2a protein.
          Length = 1066

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 374 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 469
           +GG + K+S S + G   +P S  L  H+S P
Sbjct: 819 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 850


>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
           protein K12F2.2a protein.
          Length = 1066

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 374 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 469
           +GG + K+S S + G   +P S  L  H+S P
Sbjct: 819 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 850


>Z78199-2|CAB54275.1|  582|Caenorhabditis elegans Hypothetical
           protein K12F2.2b protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 374 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 469
           +GG + K+S S + G   +P S  L  H+S P
Sbjct: 335 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 366


>AF108229-2|AAF17301.1|  582|Caenorhabditis elegans VAB-8S protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 374 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 469
           +GG + K+S S + G   +P S  L  H+S P
Sbjct: 335 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 366


>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
          Length = 1066

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 374 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 469
           +GG + K+S S + G   +P S  L  H+S P
Sbjct: 819 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 850


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,601,725
Number of Sequences: 27780
Number of extensions: 201718
Number of successful extensions: 739
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)