Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0609
         (517 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g13280.1 68418.m01525 aspartate kinase identical to aspartate...    28   4.3  
At5g42320.1 68418.m05150 zinc carboxypeptidase family protein co...    27   7.5  
At5g65950.1 68418.m08302 expressed protein                             27   9.9  
At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to cyto...    27   9.9  
At3g07000.1 68416.m00831 DC1 domain-containing protein contains ...    27   9.9  

>At5g13280.1 68418.m01525 aspartate kinase identical to aspartate
           kinase [Arabidopsis thaliana] GI:4376158
          Length = 569

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -1

Query: 253 SFVGTFLEKLPPLRRNKICSRKLTLRSIMILIFFFTECLYFRKISGFCRNL*VK 92
           S + T+LE+L  L +     ++LTLR+   L+  F ECL  R  + +   + VK
Sbjct: 172 SVILTYLEELEQLLKGIAMMKELTLRTRDYLV-SFGECLSTRIFAAYLNTIGVK 224


>At5g42320.1 68418.m05150 zinc carboxypeptidase family protein
           contains Pfam domain, PF00246: Zinc carboxypeptidase
          Length = 461

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 271 GEGGGDSFVGTFLEKLPPLRRNKICSRKLTLRSIMILIFFFTEC 140
           G     S     L  LPPL    +  RK+   S++I+I F+  C
Sbjct: 36  GHASAASLPANLLRGLPPLTIVVVTRRKIHF-SVLIIIVFYVRC 78


>At5g65950.1 68418.m08302 expressed protein
          Length = 865

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 494 DSTTTSASPERCGED*ALPIVVTTPG 417
           D +  ++ P   GED A+PIVVT+ G
Sbjct: 453 DVSLGASGPALVGEDFAMPIVVTSKG 478


>At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to
           cytochrome P450 71B10 (SP:Q9LVD2) [Arabidopsis thaliana]
          Length = 1483

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 9   PKRFSECDIEVKAAAYTVI 65
           P+RF +CDI+VK   Y ++
Sbjct: 416 PERFMDCDIDVKGQDYELL 434


>At3g07000.1 68416.m00831 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 574

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 331 PLRVVYVPIVLHYWHHERHLGEGGGDSFVG 242
           P +VV    ++H+ H E +L  GG D   G
Sbjct: 255 PYKVVNDKEIIHFCHEEHNLRLGGDDDVTG 284


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,047,064
Number of Sequences: 28952
Number of extensions: 187553
Number of successful extensions: 563
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)