Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0608
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.47 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -2

Query: 141 FCMHF---TF*FVYEFIFVNVNMTSYLFVYSFFYFTSKLK*IFNCFDFFL 1
           F +HF   T+ F Y FI +   +  Y F Y+F  FT  L  +  C  +F+
Sbjct: 92  FTVHFLLCTYYFYYAFIIL---LCVYYFYYAFIIFTVHLLFLL-CIYYFV 137



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 117 FVYEFIFVNVNMTSYLFVYSFFY 49
           F Y FI   V++   + +Y F+Y
Sbjct: 241 FYYAFILFTVHLLLLVCIYYFYY 263


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +1

Query: 367 KSTKNCKLIIVF--IYFKVDLIF 429
           K+ KNC ++I+F  I F V L F
Sbjct: 37  KTDKNCTIVIIFHLILFAVLLYF 59


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 71  KYDVILTFTKINS*TN*KVKCIQKFFFFNIMKL 169
           +Y+VIL +TKI S T   +  +Q  FF +++ L
Sbjct: 234 QYNVILRYTKIVSDTYQGILVVQ--FFCSLVAL 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,032
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)