Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0608
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF022971-13|AAG23979.1|  325|Caenorhabditis elegans Serpentine r...    27   9.8  

>Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical
           protein K03D7.9 protein.
          Length = 211

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 114 VYEFIFVNVNMTSYLFVYSFFYFTSKL 34
           VY FIF  + +TS LF Y  +    KL
Sbjct: 96  VYNFIFFIMTLTSGLFYYHLYQLLKKL 122


>AF022971-13|AAG23979.1|  325|Caenorhabditis elegans Serpentine
           receptor, class h protein247 protein.
          Length = 325

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 150 KKNFCMHFTF*FVYEFIFVNVNMTSYLFVYSFFYFTSKLK*IFNCFDF 7
           +KNF +  T      FIF+ V +   L+V  F+Y+   L  I  C  F
Sbjct: 233 QKNFLIAITLQSFLSFIFIIVPVNIILYVVVFWYYNQVLNNIM-CLMF 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,562,596
Number of Sequences: 27780
Number of extensions: 211427
Number of successful extensions: 364
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)