Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0607
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061170-1|AAL28718.1|  230|Drosophila melanogaster LD13807p pro...    90   2e-18
AE014298-915|AAF46178.1|  230|Drosophila melanogaster CG3226-PA ...    90   2e-18
AY075229-1|AAL68096.1|  262|Drosophila melanogaster AT18239p pro...    29   4.1  
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein...    29   4.1  
AE014296-2456|AAS65003.1|  262|Drosophila melanogaster CG11552-P...    29   4.1  

>AY061170-1|AAL28718.1|  230|Drosophila melanogaster LD13807p
           protein.
          Length = 230

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 54/153 (35%), Positives = 82/153 (53%)
 Frame = +3

Query: 156 IQEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEVSPIPTTST 335
           +++++SD+ E+   L+QAK  +V+D+L+                     +      T S+
Sbjct: 3   LEQLKSDVAELAAFLQQAKGARVKDVLTTA---KAEAEREIVNLELKAKIAAERQATGSS 59

Query: 336 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 515
            A   K+Y  +L  YGWDQS KFVK+F+ L  V    +E V    T  S++LHV +L+ K
Sbjct: 60  EA---KRYLHELTDYGWDQSAKFVKLFITLNGVQGCTEENVTVTYTPNSLQLHVRDLQGK 116

Query: 516 DYLLVINKLLEPINVADSHWKQKTDQVVIFLAK 614
           D+ L +N LL  I+V  S+ K KTD V I+L K
Sbjct: 117 DFGLTVNNLLHSIDVEKSYRKIKTDMVAIYLQK 149


>AE014298-915|AAF46178.1|  230|Drosophila melanogaster CG3226-PA
           protein.
          Length = 230

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 54/153 (35%), Positives = 82/153 (53%)
 Frame = +3

Query: 156 IQEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEVSPIPTTST 335
           +++++SD+ E+   L+QAK  +V+D+L+                     +      T S+
Sbjct: 3   LEQLKSDVAELAAFLQQAKGARVKDVLTTA---KAEAEREIVNLELKAKIAAERQATGSS 59

Query: 336 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 515
            A   K+Y  +L  YGWDQS KFVK+F+ L  V    +E V    T  S++LHV +L+ K
Sbjct: 60  EA---KRYLHELTDYGWDQSAKFVKLFITLNGVQGCTEENVTVTYTPNSLQLHVRDLQGK 116

Query: 516 DYLLVINKLLEPINVADSHWKQKTDQVVIFLAK 614
           D+ L +N LL  I+V  S+ K KTD V I+L K
Sbjct: 117 DFGLTVNNLLHSIDVEKSYRKIKTDMVAIYLQK 149


>AY075229-1|AAL68096.1|  262|Drosophila melanogaster AT18239p
           protein.
          Length = 262

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 18/97 (18%), Positives = 47/97 (48%)
 Frame = +3

Query: 351 KKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENKDYLLV 530
           ++Y  +LN Y +D  DK+++    +     L    +Y   T++  + H++       LL+
Sbjct: 77  ERYMAQLNTYYYDY-DKYLESSKHMYKFMGL--NLLYMLATNRLADFHIELERLPTALLL 133

Query: 531 INKLLEPINVADSHWKQKTDQVVIFLAKSNPNTTWSH 641
            +  ++P+   ++++ +     ++   KS P+  +S+
Sbjct: 134 HDSFIQPVLALENYYMEGRYNKILQAKKSMPSEIYSN 170


>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
            protein.
          Length = 2797

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/53 (28%), Positives = 32/53 (60%)
 Frame = +3

Query: 87   FVISKDLHSIQTNCSFIKMSEAKIQEIRSDIEEINDLLKQAKRKKVQDLLSLE 245
            F ++K++  ++ N   + + EAK Q+  SD++E  +LL+Q + +  +   +LE
Sbjct: 1807 FEVNKEVLPLKAN---LAVQEAKYQKASSDLQEAEELLQQKENELAEVQQTLE 1856


>AE014296-2456|AAS65003.1|  262|Drosophila melanogaster CG11552-PA
           protein.
          Length = 262

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 18/97 (18%), Positives = 47/97 (48%)
 Frame = +3

Query: 351 KKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENKDYLLV 530
           ++Y  +LN Y +D  DK+++    +     L    +Y   T++  + H++       LL+
Sbjct: 77  ERYMAQLNTYYYDY-DKYLESSKHMYKFMGL--NLLYMLATNRLADFHIELERLPTALLL 133

Query: 531 INKLLEPINVADSHWKQKTDQVVIFLAKSNPNTTWSH 641
            +  ++P+   ++++ +     ++   KS P+  +S+
Sbjct: 134 HDSFIQPVLALENYYMEGRYNKILQAKKSMPSEIYSN 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,181,753
Number of Sequences: 53049
Number of extensions: 506576
Number of successful extensions: 1419
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)