Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0604
(416 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.29
SB_28288| Best HMM Match : E-MAP-115 (HMM E-Value=0.076) 31 0.29
SB_27869| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.29
SB_34113| Best HMM Match : PSD5 (HMM E-Value=3.3) 30 0.67
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.88
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.88
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 30 0.88
SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 30 0.88
SB_18023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51) 29 2.0
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 28 2.7
SB_11431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 28 2.7
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 28 2.7
SB_48653| Best HMM Match : ABC_membrane (HMM E-Value=0.34) 28 3.6
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 28 3.6
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 3.6
SB_35821| Best HMM Match : TUDOR (HMM E-Value=0) 27 4.7
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_31105| Best HMM Match : Ank (HMM E-Value=1.6e-09) 27 6.2
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 27 6.2
SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 27 8.2
SB_34845| Best HMM Match : CXC (HMM E-Value=0.03) 27 8.2
SB_46607| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_9578| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 31.5 bits (68), Expect = 0.29
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 302 MRGIKGLVWETSVLDADE 355
MRGIKGLV ETS+LD +E
Sbjct: 1 MRGIKGLVTETSLLDPEE 18
>SB_28288| Best HMM Match : E-MAP-115 (HMM E-Value=0.076)
Length = 784
Score = 31.5 bits (68), Expect = 0.29
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +2
Query: 17 RDRSRASCRDLCGSLRSAALREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 196
RDR R RD C S RS++ RE L + SS L AT + G ++
Sbjct: 555 RDRPRERSRDSCSSARSSS-RERPLSAMLSSSWDTLPFGTTEATRMREG------RIRES 607
Query: 197 LQEKIPKEQEKIREFRKKHGSTK 265
L+E+ +EQ +++E +++ K
Sbjct: 608 LKERRAREQAELKEEQQRQKKLK 630
>SB_27869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 31.5 bits (68), Expect = 0.29
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +2
Query: 17 RDRSRASCRDLCGSLRSAALREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 196
RDR R RD C S RS++ RE L + SS L AT + G ++
Sbjct: 110 RDRPRERSRDSCSSARSSS-RERPLSAMLSSSWDTLPFGTTEATRMREG------RIRES 162
Query: 197 LQEKIPKEQEKIREFRKKHGSTK 265
L+E+ +EQ +++E +++ K
Sbjct: 163 LKERRAREQAELKEEQQRQKKLK 185
>SB_34113| Best HMM Match : PSD5 (HMM E-Value=3.3)
Length = 851
Score = 30.3 bits (65), Expect = 0.67
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +2
Query: 131 ACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRG 310
AC V RG +QTNL+ + + P+E + RK+ +++ T D G
Sbjct: 4 ACALDLVHDRGRRFDQTNLRPMAEVSFPRELQPSEIQRKEASASRESVQTSDSESPAQEG 63
Query: 311 IKGLVWETSVLDADEGIR 364
+ + S A EG R
Sbjct: 64 RQSIQTSDSESPAQEGRR 81
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 29.9 bits (64), Expect = 0.88
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 158 RGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKV 268
RGL E+ +L+ +LQE K + +E ++ HG K+
Sbjct: 544 RGLKVEKEDLERVLQEAGEKVASQQKELKEAHGQRKL 580
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 29.9 bits (64), Expect = 0.88
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 381 MDRPRKRIPSSASSTEVSQTRPLIPRMPPYIIS 283
M P + + ++A+ TE++ T+PL+P P ++S
Sbjct: 366 MPAPTESVVTTATPTEIAVTKPLLPPKPSGLVS 398
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 29.9 bits (64), Expect = 0.88
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 203 EKIPKEQEKIREFRKKHGSTKVGEVTVD 286
E+I QEKI+E RK +GS K T+D
Sbjct: 924 ERIRLLQEKIKEMRKLYGSLKAEVATID 951
>SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 407
Score = 29.9 bits (64), Expect = 0.88
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 381 MDRPRKRIPSSASSTEVSQTRPLIPRMPPYIIS 283
M P + + ++A+ TE++ T+PL+P P ++S
Sbjct: 118 MPAPTESVVTTATPTEIAVTKPLLPPKPSGLVS 150
>SB_18023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +2
Query: 173 EQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDAD 352
E L I + + E RE K + G ++ + +GL W+ S D D
Sbjct: 131 EHCRLMGIAVQYLINEGHNFRESDKICMKYEAGPCLGPVLDDTVLRARGLPWQAS--DQD 188
Query: 353 EGIRFRGLSIPECQQQL 403
FRGL+IP C ++
Sbjct: 189 VANFFRGLNIPSCVSRM 205
>SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51)
Length = 976
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 188 KSILQEKIPKEQEKIREFRKKHGSTK 265
K +++EK P E++K E +KKH S K
Sbjct: 109 KKVIKEKDPSEKKKDGESKKKHRSEK 134
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 35 SCRDLCGSLRSAALREVALFR 97
+CR LC SLR+ LRE+ L R
Sbjct: 1917 NCRKLCVSLRAKHLREIKLLR 1937
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 165 RPRSRTVAVGHAFC----NSTSLEDVILNRATSLKAAERKLPHKSRQLARDR 22
RP+S VA G FC N T D I N+A++LK +L + + L D+
Sbjct: 193 RPKSSFVAAGSEFCKGKKNVTGSSD-IPNKASTLKKKNGQLFKQGKSLFHDK 243
>SB_11431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 131 ACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEV 277
AC V RG +QTNL+ + + P+E + I E ++K T G +
Sbjct: 4 ACALDLVHDRGRRFDQTNLRPMAEVSFPRELQPI-EIQRKEACTGPGMI 51
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 332 TSVLDADEGIRFRGLSIPECQQQLPKA 412
+S+ DA IRF LS+PE + + PK+
Sbjct: 872 SSIFDALRNIRFPRLSLPELEGRFPKS 898
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 89 LFRITSSRLVELQKACPTA-TVLLRGLSAEQTNLKSILQEKIPKEQEKIR 235
L + R+ EL+ A A + + G+ A++ + K++ EKI KE+EK++
Sbjct: 297 LIQTLQKRIKELESAGTQAGSKIDTGMGAKRKDSKAVDPEKIAKEKEKLQ 346
>SB_48653| Best HMM Match : ABC_membrane (HMM E-Value=0.34)
Length = 264
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -3
Query: 207 FSWRILFKFVC----SALRPRSRTVAVGHAFCNSTSLEDVIL 94
F W +L FV S + PRSR G C STS+ ++L
Sbjct: 135 FDWMLLTCFVIDKLESMITPRSRAAWAGLMKCPSTSISGIML 176
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 98 ITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGE 274
+ SS L+ + K T T + L+ E T LK L+ EQ+ + G K+GE
Sbjct: 812 MASSSLM-MNKVITTTTDSINDLNEEMTELKIQLETGFETEQDLRTSLNQAEGRIKLGE 869
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = -3
Query: 378 DRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPCF 247
D+P IPS SST S MPP +ST T P P F
Sbjct: 789 DQPIPAIPSLMSSTLTSSISTTSTGMPPASLSTPT-PFFTHPGF 831
>SB_35821| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 754
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 408 LGSCCWHSGMDRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVE 256
+ C G+D R+R S+ S + S T+ L + P I++ P L E
Sbjct: 91 VAKCTLAGGVDAYRRRFLSNTSRSSQSTTKSLDTKTRPTAITSARLPRLKE 141
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 27.1 bits (57), Expect = 6.2
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Frame = +2
Query: 98 ITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEV 277
+ SS+L K T L+ E NLK LQ+K+ + ++ E R K+
Sbjct: 1896 LDSSKLKTEAKILREETERLKAQLEETMNLKEELQDKLHTAEHELFEARTSEEKAKIEHR 1955
Query: 278 TVDMMYGGMRG-IKGLVWET-SVLDADEGIRFRGLSIPECQQQLPKA 412
D+ +R K E L A+E R S + Q QL KA
Sbjct: 1956 DKDIELAALRKYFKDTESELHRKLTAEESARL--ASENQLQNQLSKA 2000
>SB_31105| Best HMM Match : Ank (HMM E-Value=1.6e-09)
Length = 174
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 137 PTATVLLRGLSAEQTNLKSILQE-KIPKEQEKIREFRKKHGSTKVGEVTVDMMYGG 301
P AT + LS+ + ++++ ++ K ++KI E +KK GS+ + T + + GG
Sbjct: 30 PRATPKVSPLSSPTGSNENLVDAAQMTKNEKKISE-KKKEGSSSLSRATKERLLGG 84
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 348 ASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPCFFRNSRIFS 223
A +T +QTR I Y +S+VT+P P F + S
Sbjct: 471 AVTTPTAQTRSAITSPHAYTVSSVTAPAATSPNGFSGPEVNS 512
>SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1357
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 212 PKEQEKIREFRKKHGSTKVGEV 277
P E++ +RE K+HG T +G++
Sbjct: 920 PFEEKYVREISKRHGFTIIGKI 941
>SB_34845| Best HMM Match : CXC (HMM E-Value=0.03)
Length = 1397
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 182 SSVQRLDLEVELSQSDMLSAILRVLKM*S*IEPPLLKPPSANYHTNH 42
S +Q+L L EL + RV++ +EPP+ + P A T H
Sbjct: 793 SRLQQLKLCQELEEISAQEVFQRVVESEDILEPPIEQSPRAKCATRH 839
>SB_46607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 131 ACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVG 271
AC V RG +QTNL+ + + P+E + RK+ +++ G
Sbjct: 4 ACALDLVHDRGRRFDQTNLRPMAEVSFPRELQPSEIQRKEASASREG 50
>SB_9578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 131 ACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVD 286
AC V RG +QTN++ + + P+E + RK+ +++ G+ +++
Sbjct: 4 ACALDLVHDRGRRFDQTNVRPMAEVSFPRELQPSEIQRKEASASREGQNSLE 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,419,607
Number of Sequences: 59808
Number of extensions: 263896
Number of successful extensions: 963
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 777158991
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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