Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0604
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical pr... 116 7e-27
AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical ... 32 0.19
AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical ... 32 0.19
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 0.44
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 30 0.59
Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 28 2.4
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 28 2.4
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 2.4
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 28 2.4
U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormon... 27 4.1
U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone... 27 4.1
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 27 4.1
AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear recep... 27 4.1
AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear recep... 27 4.1
AF025460-5|AAB70988.5| 584|Caenorhabditis elegans Polh (dna pol... 27 4.1
AB244413-1|BAE72703.1| 584|Caenorhabditis elegans DNA polymeras... 27 4.1
U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2 ... 27 5.5
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 27 5.5
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 27 7.2
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 27 7.2
U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical pr... 27 7.2
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 7.2
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 7.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 27 7.2
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 27 7.2
U00031-9|AAK18871.1| 470|Caenorhabditis elegans Hypothetical pr... 26 9.5
AL032627-11|CAA21547.1| 233|Caenorhabditis elegans Hypothetical... 26 9.5
>Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical
protein T20G5.2 protein.
Length = 468
Score = 116 bits (279), Expect = 7e-27
Identities = 59/116 (50%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Frame = +2
Query: 71 ALREVALFRITSSRLVELQKACPTATVLLRGLSAE-QTNLKSILQEKIPKEQEKIREFRK 247
+L +A+ R+ + ++ + + P +T SAE TNLK +L +KIP K++ FR
Sbjct: 2 SLSGMAIRRLITKGVIPVCQVAPLST------SAEGSTNLKEVLSKKIPAHNAKVKSFRT 55
Query: 248 KHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAK 415
+HGST V V +DM+YGGMR +KG+V ETSVLD +EGIRFRG SIPECQ+ LPKAK
Sbjct: 56 EHGSTVVQNVNIDMIYGGMRSMKGMVTETSVLDPEEGIRFRGYSIPECQKLLPKAK 111
>AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical
protein Y49C4A.8b protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 74 LREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKK 250
L ++F I S+ + + TV + G+S NLK I ++K+ K+ E++ E RKK
Sbjct: 247 LSTASIFFINSNPFFDFPRPVLQKTVPIGGISV---NLKWIKEQKLTKDWEEVLEMRKK 302
>AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical
protein Y49C4A.8a protein.
Length = 536
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 74 LREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKK 250
L ++F I S+ + + TV + G+S NLK I ++K+ K+ E++ E RKK
Sbjct: 247 LSTASIFFINSNPFFDFPRPVLQKTVPIGGISV---NLKWIKEQKLTKDWEEVLEMRKK 302
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 137 PTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGE 274
PT+T+ L L + NL S+ E+ K +EKI + R++ + + E
Sbjct: 2424 PTSTIDLNMLQGIEDNLNSLPAEESDKIREKINDLRRRKQESDLAE 2469
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 137 PTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKK 250
PT+T+ L L + NL S+ E+ K +EKI + R++
Sbjct: 2482 PTSTIDLNMLQGIEDNLNSLPAEESDKIREKINDLRRR 2519
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 30.3 bits (65), Expect = 0.59
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 372 PRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEP 253
P + P ST Q RP PR PY+ + T+ +EP
Sbjct: 226 PARPAPYIEPSTAKPQPRPQPPRTRPYVAPSTTTQRYIEP 265
>Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical
protein T21B10.3 protein.
Length = 1170
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 399 CCWHSG-MDRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPCFFRN 238
C W S + P+K++PS T Q ++ P +STV+ C+FR+
Sbjct: 585 CSWFSSSLQNPKKQVPSGVYKTIAEQHLDEFEQIKPEEVSTVSD------CYFRS 633
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 86 ALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTK 265
+L ++ SR+ EL+ ++ L A+ +++I QEK+ + Q+ EF + +
Sbjct: 1019 SLEKVNHSRIEELESRLTQRERVVESLEADLAAVRNIEQEKLDELQKLKEEFDELKKAET 1078
Query: 266 VGEVTVDMM 292
+ + DM+
Sbjct: 1079 MWQAEKDML 1087
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 86 ALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTK 265
+L ++ SR+ EL+ ++ L A+ +++I QEK+ + Q+ EF + +
Sbjct: 1021 SLEKVNHSRIEELESRLTQRERVVESLEADLAAVRNIEQEKLDELQKLKEEFDELKKAET 1080
Query: 266 VGEVTVDMM 292
+ + DM+
Sbjct: 1081 MWQAEKDML 1089
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 164 LSAEQTNLKSILQEKIPKEQEKIREFRKKH 253
L+ E NLK L++K E + I E +KKH
Sbjct: 318 LTEENHNLKEQLKQKTDAETKMIAEMKKKH 347
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 327 QTRPLIPRMPPYIISTVTSPTLVEPCFFRNSR 232
QTRP P++PP I+ T V+P FF+ +R
Sbjct: 365 QTRP--PQLPPVQITQPPIQTPVQPIFFQTTR 394
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 327 QTRPLIPRMPPYIISTVTSPTLVEPCFFRNSR 232
QTRP P++PP I+ T V+P FF+ +R
Sbjct: 462 QTRP--PQLPPVQITQPPIQTPVQPIFFQTTR 491
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 86 ALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTK 265
+L ++ SR+ EL+ ++ L A+ +++I QEK+ + Q+ EF + +
Sbjct: 1021 SLEKVNHSRIEELESRLTQRERVVESLEADLAAVRNIEQEKLDELQKLKEEFDELKKAET 1080
Query: 266 VGEVTVDMM 292
+ + DM+
Sbjct: 1081 MWQAEKDML 1089
>U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform b protein.
Length = 486
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 50 CGSLRSAALREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEK 229
C + + + ++ + V L KAC + GLS NL + KI EK
Sbjct: 267 CEKVMDQLVEPMRFLKLDNKEFVAL-KACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEK 325
Query: 230 IREFRKKHGSTKVGEVT 280
K +T+VG++T
Sbjct: 326 YVRVNKPLETTRVGDLT 342
>U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform a protein.
Length = 542
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 50 CGSLRSAALREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEK 229
C + + + ++ + V L KAC + GLS NL + KI EK
Sbjct: 323 CEKVMDQLVEPMRFLKLDNKEFVAL-KACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEK 381
Query: 230 IREFRKKHGSTKVGEVT 280
K +T+VG++T
Sbjct: 382 YVRVNKPLETTRVGDLT 398
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 245 KKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQL 403
+KHG +GE+ + ++ I + VL DEGI FRGL I + Q L
Sbjct: 89 RKHGG--LGEMNIPVLADTNHQISR---DYGVLKEDEGIAFRGLFIIDPSQNL 136
>AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 487
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 50 CGSLRSAALREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEK 229
C + + + ++ + V L KAC + GLS NL + KI EK
Sbjct: 268 CEKVMDQLVEPMRFLKLDNKEFVAL-KACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEK 326
Query: 230 IREFRKKHGSTKVGEVT 280
K +T+VG++T
Sbjct: 327 YVRVNKPLETTRVGDLT 343
>AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 508
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 50 CGSLRSAALREVALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEK 229
C + + + ++ + V L KAC + GLS NL + KI EK
Sbjct: 289 CEKVMDQLVEPMRFLKLDNKEFVAL-KACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEK 347
Query: 230 IREFRKKHGSTKVGEVT 280
K +T+VG++T
Sbjct: 348 YVRVNKPLETTRVGDLT 364
>AF025460-5|AAB70988.5| 584|Caenorhabditis elegans Polh (dna
polymerase eta) homologprotein 1 protein.
Length = 584
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 228 FSCSLGIFSWRILFKFVCSALRPRSRTV 145
F CS G+ + +++ K VC+ +PR +T+
Sbjct: 209 FFCSAGVGNNKMMAKLVCARHKPRQQTL 236
>AB244413-1|BAE72703.1| 584|Caenorhabditis elegans DNA polymerase
eta protein.
Length = 584
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 228 FSCSLGIFSWRILFKFVCSALRPRSRTV 145
F CS G+ + +++ K VC+ +PR +T+
Sbjct: 209 FFCSAGVGNNKMMAKLVCARHKPRQQTL 236
>U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2
protein.
Length = 508
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 210 IFSWRILFKFVCSALRPRSRTVAVGHAFCNSTSLED 103
+F W ILF + ++ P V V NSTSLE+
Sbjct: 2 VFRWLILFVLLYRSVLPAEEVVVV-DILTNSTSLEE 36
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -1
Query: 182 SSVQRLDLEVELSQSDMLSAILRVLKM*S*IEPPLLKPPSANYHTNHDNLP 30
S ++ L+ LSQ L+ + + + +EPP+ PP + Y +N P
Sbjct: 78 SDIRYLETITNLSQQ-ALNNVKSTIDTINEVEPPITSPPRSQYQAPWNNQP 127
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 92 IEPPLLKP-PSANYHTNHDNLPAIDPS 15
IEP KP PS + ++HDN P +PS
Sbjct: 365 IEPSNSKPYPSDSSWSDHDNAPGSEPS 391
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 92 IEPPLLKP-PSANYHTNHDNLPAIDPS 15
IEP KP PS + ++HDN P +PS
Sbjct: 690 IEPSNSKPYPSDSSWSDHDNAPGSEPS 716
>U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical
protein T25D10.2 protein.
Length = 231
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 358 SFIGIQHRGFPNQTFDSTHATVHH---INCDLSDFSG 257
S I + FPN T +H + HH C++++F+G
Sbjct: 173 SHISSDYVAFPNGTLIISHFSYHHFGYFECNINNFAG 209
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 26.6 bits (56), Expect = 7.2
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Frame = +2
Query: 23 RSRASCRDLCGSLRSAA----LREVALFRITS-------SRLVELQKACPTATVLLRGLS 169
R RA R + LR++A +REVAL ++ S L+ C T+ +
Sbjct: 1644 RERAESR-VFAQLRASADEITIREVALGSMSQLEQAAFMSLLITSVSRCDLRTIAPSNII 1702
Query: 170 AEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRG 310
A + +EK+ RE RK+H S K +++ G +G
Sbjct: 1703 ANTEIFYDVAEEKMSVSGVMKRESRKEHSSKKFTSSREEIIQGFWKG 1749
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 26.6 bits (56), Expect = 7.2
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Frame = +2
Query: 23 RSRASCRDLCGSLRSAA----LREVALFRITS-------SRLVELQKACPTATVLLRGLS 169
R RA R + LR++A +REVAL ++ S L+ C T+ +
Sbjct: 1644 RERAESR-VFAQLRASADEITIREVALGSMSQLEQAAFMSLLITSVSRCDLRTIAPSNII 1702
Query: 170 AEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRG 310
A + +EK+ RE RK+H S K +++ G +G
Sbjct: 1703 ANTEIFYDVAEEKMSVSGVMKRESRKEHSSKKFTSSREEIIQGFWKG 1749
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -3
Query: 366 KRIPSSASSTEVSQTRPLIPRMPPYII---STVTSPTLVEP 253
++IP + Q P+IP++P I STVT+ + V P
Sbjct: 690 EKIPEKIDKPPLPQAAPIIPKLPQKSIKAPSTVTTRSKVPP 730
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 205 KDSQGTREDPRIPKEAWF 258
K S G R P+IPK A+F
Sbjct: 810 KKSDGNRRSPKIPKSAYF 827
>U00031-9|AAK18871.1| 470|Caenorhabditis elegans Hypothetical
protein B0361.8 protein.
Length = 470
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 174 SALRPRSRTVAVGHAFCNSTSLEDVILNRATSLKAAERKLP-HK 46
S R +S+TVA H +CN+ + +L A ++ ++K P HK
Sbjct: 34 SGFRRKSKTVAFFHPYCNAGGGGERVLWAA--IRTMQKKFPDHK 75
>AL032627-11|CAA21547.1| 233|Caenorhabditis elegans Hypothetical
protein Y41C4A.8 protein.
Length = 233
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 218 EQEKIREFRKKHGSTKVGEVTVDMMY 295
+++K+ EF KK+G+ E+T D +Y
Sbjct: 186 DEKKVVEFMKKYGNRAPEEITRDGLY 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,692,518
Number of Sequences: 27780
Number of extensions: 190079
Number of successful extensions: 785
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -