Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0600
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical p...    28   4.2  
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ...    28   4.2  
AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical ...    28   4.2  
U80838-5|AAT48617.1|  317|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U64599-2|ABB88205.1|  420|Caenorhabditis elegans Unidentified vi...    27   7.3  
U64599-1|AAB04560.3|  426|Caenorhabditis elegans Unidentified vi...    27   7.3  

>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 477 FDKLVSFFAIGMVFKITLKPKPDIQF 400
           F  LV+FF  G +F   L  KPD+ +
Sbjct: 683 FSALVTFFCFGAIFMYLLHRKPDVNW 708


>Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 477 FDKLVSFFAIGMVFKITLKPKPDIQF 400
           F  LV+FF  G +F   L  KPD+ +
Sbjct: 683 FSALVTFFCFGAIFMYLLHRKPDVNW 708


>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 477 FDKLVSFFAIGMVFKITLKPKPDIQF 400
           F  LV+FF  G +F   L  KPD+ +
Sbjct: 683 FSALVTFFCFGAIFMYLLHRKPDVNW 708


>AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 477 FDKLVSFFAIGMVFKITLKPKPDIQF 400
           F  LV+FF  G +F   L  KPD+ +
Sbjct: 683 FSALVTFFCFGAIFMYLLHRKPDVNW 708


>U80838-5|AAT48617.1|  317|Caenorhabditis elegans Hypothetical
           protein F47F6.9 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 153 RLRNRSLIFHKLASATSNSLCDEKTHINH 239
           +LRNR ++F  + SAT+++ CD+   I H
Sbjct: 250 QLRNRCILFCIVYSATADNKCDKILMITH 278


>U64599-2|ABB88205.1|  420|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 6, isoform b
           protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 489 CYWHVFIQMKNS*RGNNNTHR 551
           CY+HVF +++ + +G+   HR
Sbjct: 202 CYYHVFCKLREAAKGSRRLHR 222


>U64599-1|AAB04560.3|  426|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 6, isoform a
           protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 489 CYWHVFIQMKNS*RGNNNTHR 551
           CY+HVF +++ + +G+   HR
Sbjct: 202 CYYHVFCKLREAAKGSRRLHR 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,676,710
Number of Sequences: 27780
Number of extensions: 188830
Number of successful extensions: 394
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)