Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0600
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.41 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   0.94 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   0.94 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   6.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   6.7  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 138 DKCYSRLRNRSLIFHKLASATSNS 209
           D    R+ NRS I H  ASA +NS
Sbjct: 733 DSLSPRVENRSAIVHSEASANANS 756


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 127 FNVVRKFTQLADT*Y*KADNLNT 59
           FN+ +KF  L  + Y K  NLNT
Sbjct: 460 FNMFKKFASLKKSPYFKEANLNT 482


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 127 FNVVRKFTQLADT*Y*KADNLNT 59
           FN+ +KF  L  + Y K  NLNT
Sbjct: 460 FNMFKKFASLKKSPYFKEANLNT 482


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 231 YAFSHHRVSLKLQRRV 184
           YA SH +  L+LQ+R+
Sbjct: 328 YAISHPKYRLELQKRL 343


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 498 HVFIQMKNS*RGNNNTHRY 554
           H + QM  +   NNNT++Y
Sbjct: 127 HKWFQMSINNTNNNNTNKY 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,822
Number of Sequences: 438
Number of extensions: 2123
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)