Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0600
         (578 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid sy...    27   6.8  
At5g67420.1 68418.m08501 LOB domain protein 37 / lateral organ b...    27   9.0  

>At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid
           synthase family protein similar to cyclopropane synthase
           [Sterculia foetida] GI:21069167; contains Pfam profile
           PF02353: Cyclopropane-fatty-acyl-phospholipid synthase
          Length = 406

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 164 ISQSGVAFIDKFFQRCEEIHAVSGYLILK 78
           I   G  F+DKFF  CE+  A +G  +L+
Sbjct: 242 IEAVGHEFMDKFFSCCEDALAENGIFVLQ 270


>At5g67420.1 68418.m08501 LOB domain protein 37 / lateral organ
           boundaries domain protein 37 (LBD37) identical to LOB
           DOMAIN 37 [Arabidopsis thaliana] GI:17227170
          Length = 250

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 127 KNLSINATPDCEIDP*YFINSPLQLQTHSVMRKRILTMSLN 249
           K LS    P  E+D     N P++  T S  R+R +T S+N
Sbjct: 175 KRLSSEDQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMN 215


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,852,421
Number of Sequences: 28952
Number of extensions: 167888
Number of successful extensions: 378
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)