Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0599
(545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 223 4e-58
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 222 6e-58
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 222 6e-58
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 222 6e-58
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 222 6e-58
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 222 6e-58
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 222 6e-58
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 222 6e-58
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 221 1e-57
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 221 1e-57
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 215 6e-56
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 215 6e-56
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 215 6e-56
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 215 6e-56
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 215 6e-56
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 215 6e-56
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 206 5e-53
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 91 3e-18
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.1
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 6.1
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 6.1
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 6.1
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 223 bits (544), Expect = 4e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 86.6 bits (205), Expect = 5e-17
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLP 43
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 222 bits (543), Expect = 6e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 222 bits (543), Expect = 6e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 222 bits (543), Expect = 6e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 222 bits (543), Expect = 6e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 222 bits (543), Expect = 6e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 222 bits (543), Expect = 6e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 222 bits (543), Expect = 6e-58
Identities = 105/159 (66%), Positives = 119/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 221 bits (541), Expect = 1e-57
Identities = 101/139 (72%), Positives = 115/139 (82%)
Frame = +3
Query: 129 PTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 308
P PL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+K
Sbjct: 16 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 75
Query: 309 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 488
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 76 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 135
Query: 489 KVNDSIQLDIATTKIMDFI 545
KVND+IQ+D+ T KI DFI
Sbjct: 136 KVNDTIQIDLETGKITDFI 154
Score = 48.8 bits (111), Expect = 1e-05
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 80 MLDKLGGVYAPRPSTGPHKLRECLP 154
MLDKL GV+APRPS GPHKLRECLP
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLP 24
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 221 bits (541), Expect = 1e-57
Identities = 101/139 (72%), Positives = 115/139 (82%)
Frame = +3
Query: 129 PTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 308
P PL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+K
Sbjct: 15 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 74
Query: 309 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 488
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 75 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 134
Query: 489 KVNDSIQLDIATTKIMDFI 545
KVND+IQ+D+ T KI DFI
Sbjct: 135 KVNDTIQIDLETGKITDFI 153
Score = 51.6 bits (118), Expect = 2e-06
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 86 DKLGGVYAPRPSTGPHKLRECLP 154
DKL GV+APRPSTGPHKLRECLP
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLP 23
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 215 bits (526), Expect = 6e-56
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FI
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 215 bits (526), Expect = 6e-56
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 14 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 73
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 74 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 133
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FI
Sbjct: 134 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 172
Score = 86.6 bits (205), Expect = 5e-17
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = +2
Query: 29 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 42
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 215 bits (526), Expect = 6e-56
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FI
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 215 bits (526), Expect = 6e-56
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FI
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 215 bits (526), Expect = 6e-56
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FI
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 215 bits (526), Expect = 6e-56
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FI
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 206 bits (502), Expect = 5e-53
Identities = 95/159 (59%), Positives = 114/159 (71%)
Frame = +3
Query: 69 PKHGCWTNLAVCMHRDRQPVPTSCASACPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 248
PKH L P PL++FLRNRLKYALTG+EV KI Q +K+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDG 74
Query: 249 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 428
KVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTK 134
Query: 429 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 545
+P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FI
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFI 173
Score = 88.6 bits (210), Expect = 1e-17
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 154
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLP 43
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 90.6 bits (215), Expect = 3e-18
Identities = 41/59 (69%), Positives = 45/59 (76%)
Frame = +2
Query: 26 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPXGDFPEESSEVCFDRK 202
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLP F + DR+
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALDRR 59
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 267 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 413
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 267 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 413
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 177 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 353
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 39 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 97
Query: 354 TIHRI 368
HRI
Sbjct: 98 KKHRI 102
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 422
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 177 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 353
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 784 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 842
Query: 354 TIHRI 368
HRI
Sbjct: 843 KKHRI 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,539,972
Number of Sequences: 237096
Number of extensions: 1837717
Number of successful extensions: 12684
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12682
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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