Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0596
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 224 4e-59
08_02_0893 + 22327485-22327671,22327756-22328627 199 1e-51
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 196 1e-50
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 183 1e-46
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 157 6e-39
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 129 2e-30
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 128 2e-30
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 126 9e-30
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 122 2e-28
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 116 1e-26
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 116 1e-26
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 112 2e-25
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 108 3e-24
09_02_0241 + 6179869-6180116,6180406-6180436,6182038-6182190,618... 102 2e-22
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 99 2e-21
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 87 1e-17
08_02_1232 + 25429955-25430392,25430885-25431388,25432657-254328... 79 3e-15
04_03_0847 - 20254736-20254933,20256127-20256201,20257538-202577... 42 3e-04
12_02_0758 - 22858221-22858367,22859362-22859460,22859505-228595... 30 1.1
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 28 4.5
10_03_0033 - 7248131-7248711,7248947-7249079,7249470-7249994,725... 28 6.0
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 27 7.9
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 27 7.9
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 224 bits (547), Expect = 4e-59
Identities = 99/129 (76%), Positives = 117/129 (90%)
Frame = +3
Query: 180 DELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGD 359
D + +D++I++L++V+ KPG N QL+E EIK LC S+EIFL+QP LLELEAP+KICGD
Sbjct: 2 DPVLLDDIIRRLIEVKNLKPGKNAQLSESEIKQLCATSKEIFLNQPNLLELEAPIKICGD 61
Query: 360 IHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 539
+HGQY DLLRLF+YGG+PP+SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
Sbjct: 62 VHGQYSDLLRLFDYGGYPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 121
Query: 540 HECASINRI 566
HECAS+NRI
Sbjct: 122 HECASVNRI 130
>08_02_0893 + 22327485-22327671,22327756-22328627
Length = 352
Score = 199 bits (486), Expect = 1e-51
Identities = 91/128 (71%), Positives = 108/128 (84%), Gaps = 3/128 (2%)
Frame = +3
Query: 192 IDNVIKKLL---KVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 362
+D +I++LL KV+ VQL+E EI+ LC+ ++IFLSQP LLELEAP+ +CGDI
Sbjct: 6 VDELIRRLLDGKKVKPSSSAKKVQLSEAEIRQLCVTGKDIFLSQPNLLELEAPINVCGDI 65
Query: 363 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 542
HGQ+ DLLRLFE+GG PP +NYLFLGDYVDRGKQS+ETICLLLAYKIKYP+NFFLLRGNH
Sbjct: 66 HGQFSDLLRLFEFGGLPPTANYLFLGDYVDRGKQSIETICLLLAYKIKYPDNFFLLRGNH 125
Query: 543 ECASINRI 566
ECASINRI
Sbjct: 126 ECASINRI 133
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 196 bits (478), Expect = 1e-50
Identities = 96/146 (65%), Positives = 111/146 (76%), Gaps = 17/146 (11%)
Frame = +3
Query: 180 DELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKIC-- 353
D +D++I++LL RG + QL + EI+ LC ++++FLSQP LLELEAP+KIC
Sbjct: 2 DAAALDDLIRRLLDARGGRTARPAQLADAEIRKLCAAAKDVFLSQPNLLELEAPIKICEC 61
Query: 354 ---------------GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLL 488
GDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQS+ETICLL
Sbjct: 62 DCIMLTIILPTYSLTGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSIETICLL 121
Query: 489 LAYKIKYPENFFLLRGNHECASINRI 566
LAYKIKYPENFFLLRGNHECASINRI
Sbjct: 122 LAYKIKYPENFFLLRGNHECASINRI 147
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 183 bits (445), Expect = 1e-46
Identities = 82/125 (65%), Positives = 102/125 (81%)
Frame = +3
Query: 192 IDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 371
+D V+++L V G + G VQL+E EI+ LC++++ + LSQP LL + AP+KICGDIHGQ
Sbjct: 9 VDEVVRRL--VEGGRGGRQVQLSEAEIRQLCVEAKRVLLSQPNLLRIHAPVKICGDIHGQ 66
Query: 372 YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 551
+ DLLRLF+ GG+PP S YLFLGDYVDRGKQSLETICLLLAYK+KYP+ FLLRGNHE A
Sbjct: 67 FVDLLRLFDLGGYPPTSTYLFLGDYVDRGKQSLETICLLLAYKVKYPDKIFLLRGNHEDA 126
Query: 552 SINRI 566
INR+
Sbjct: 127 KINRV 131
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 157 bits (381), Expect = 6e-39
Identities = 81/134 (60%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
Frame = +3
Query: 180 DELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKI--- 350
DEL ++ ++ E P ++ L E++ L + + + ++ +EAPL
Sbjct: 89 DELIVNVGSCNHFQISQEGPVSSLLLPLTEMEELGEHTATVAIDLQLISAVEAPLAKGWG 148
Query: 351 --CGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 524
GDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF
Sbjct: 149 YGYGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 208
Query: 525 LLRGNHECASINRI 566
LLRGNHECASINRI
Sbjct: 209 LLRGNHECASINRI 222
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +3
Query: 180 DELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICG 356
D + +D++I++LL+VR +PG VQL+E EI+ LC SREIFLSQP LLELEAP+KICG
Sbjct: 16 DAVLLDDIIRRLLEVRTARPGKQVQLSESEIRQLCTVSREIFLSQPNLLELEAPIKICG 74
>03_05_0488 - 24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 129 bits (311), Expect = 2e-30
Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 8/130 (6%)
Frame = +3
Query: 201 VIKKLLKVRGEKPGMNVQ--LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 374
VI LLK RG KP + Q L EI LC + IF S+P +L+L+AP+KI GD+HGQ+
Sbjct: 651 VIASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPVKIFGDLHGQF 710
Query: 375 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 536
DL+RLF+ G P + +YLFLGDYVDRG+ SLET+ LLLA K++YP+N L+RG
Sbjct: 711 GDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETMTLLLALKVEYPQNVHLIRG 770
Query: 537 NHECASINRI 566
NHE A IN +
Sbjct: 771 NHEAADINAL 780
>12_02_1128 - 26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 128 bits (310), Expect = 2e-30
Identities = 70/130 (53%), Positives = 88/130 (67%), Gaps = 8/130 (6%)
Frame = +3
Query: 201 VIKKLLKVRGEKPGMNVQ--LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 374
VI LLK RG KP + Q L EI LC + IF S+P +L+L+AP+KI GD+HGQ+
Sbjct: 642 VIASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 701
Query: 375 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 536
DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 702 GDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRG 761
Query: 537 NHECASINRI 566
NHE A IN +
Sbjct: 762 NHEAADINAL 771
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 126 bits (305), Expect = 9e-30
Identities = 59/110 (53%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
Frame = +3
Query: 255 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES---- 422
L E+ LC + +IF+ +P +L+L+AP+K+ GD+HGQ+ DL+RLF+ G+P +
Sbjct: 520 LDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGYPSTAGDIT 579
Query: 423 --NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 566
+YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RGNHE A IN +
Sbjct: 580 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINAL 629
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 122 bits (294), Expect = 2e-28
Identities = 51/104 (49%), Positives = 76/104 (73%)
Frame = +3
Query: 255 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 434
L E E++ LC K++EI + + + +++P+ ICGDIHGQ++DL LF GG P++NYLF
Sbjct: 21 LPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLF 80
Query: 435 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 566
+GDYVDRG S+ET+ LL+A K++YP+ +LRGNHE I ++
Sbjct: 81 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV 124
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 116 bits (280), Expect = 1e-26
Identities = 48/104 (46%), Positives = 73/104 (70%)
Frame = +3
Query: 255 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 434
L E E++ LC +++ I + + + + P+ +CGDIHGQ+YDL+ LF GG P++NYLF
Sbjct: 20 LGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLF 79
Query: 435 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 566
+GDYVDRG S+ET+ LL+A K++Y + +LRGNHE I ++
Sbjct: 80 MGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQV 123
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 116 bits (279), Expect = 1e-26
Identities = 48/104 (46%), Positives = 73/104 (70%)
Frame = +3
Query: 255 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 434
L E E++ LC +++ I + + + + P+ +CGDIHGQ+YDL+ LF GG P++NYLF
Sbjct: 21 LAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLF 80
Query: 435 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 566
+GDYVDRG S+ET+ LL+A K++Y + +LRGNHE I ++
Sbjct: 81 MGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQV 124
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 112 bits (269), Expect = 2e-25
Identities = 47/104 (45%), Positives = 71/104 (68%)
Frame = +3
Query: 255 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 434
L E E++ LC +EI + + + + +P+ +CGDIHGQ++DL++LF GG PE+NY+F
Sbjct: 16 LAEHELQSLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFATGGHVPETNYIF 75
Query: 435 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 566
+GD+VDRG SLE +LL K +YP + LLRGNHE + ++
Sbjct: 76 MGDFVDRGFNSLEVFTILLLLKARYPAHITLLRGNHESRQLTQV 119
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 108 bits (259), Expect = 3e-24
Identities = 46/91 (50%), Positives = 67/91 (73%)
Frame = +3
Query: 294 REIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE 473
R +LS + +++P+ ICGDIHGQ++DL+ LF GG P++NYLF+GDYVDRG S+E
Sbjct: 94 RRKYLSGIGMKPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVE 153
Query: 474 TICLLLAYKIKYPENFFLLRGNHECASINRI 566
T+ LL+A K++YP+ +LRGNHE I ++
Sbjct: 154 TVTLLVALKVRYPQRITILRGNHESRQITQV 184
>09_02_0241 +
6179869-6180116,6180406-6180436,6182038-6182190,
6182921-6182983,6183396-6183664,6184055-6184133,
6184213-6184263
Length = 297
Score = 102 bits (244), Expect = 2e-22
Identities = 44/73 (60%), Positives = 56/73 (76%)
Frame = +3
Query: 348 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 527
ICGDIHGQ+YD+ LF+ GG P++NYLFLGD+VDRG S+ET LLLA K++YP+ L
Sbjct: 94 ICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITL 153
Query: 528 LRGNHECASINRI 566
+RGNHE I +I
Sbjct: 154 IRGNHESRQITQI 166
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 255 LTEIEIKGLCLKSREIFLSQPILLELEAPLKI 350
LTE E+K LCLK+ EI + + + ++AP+ +
Sbjct: 19 LTEAEVKALCLKAMEILVEESNVQRVDAPVTV 50
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Frame = +3
Query: 279 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 443
+ L++ ++ S P L+++ P +CGD+HGQY+DLL +F+ G P E N YLF GD
Sbjct: 197 IVLQTVQLLRSVPSLVDVNVPDGSHFTVCGDVHGQYFDLLNIFKLNGLPSEENPYLFNGD 256
Query: 444 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 566
+VDRG S+E I L A+K YP +L RGNHE S+N+I
Sbjct: 257 FVDRGSFSVEVILTLFAFKCLYPTGMYLARGNHESKSMNKI 297
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +3
Query: 324 LELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI 503
L +++P+ ICGDIHGQ++DL+ LF GG P++NYLF+GDYVDRG S+ET+ LL+A KI
Sbjct: 77 LPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKI 136
Query: 504 KYPENFF 524
F+
Sbjct: 137 TQVYGFY 143
>08_02_1232 +
25429955-25430392,25430885-25431388,25432657-25432803,
25432999-25433106,25433242-25433331
Length = 428
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Frame = +3
Query: 348 ICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 524
+ GD+HGQ +D++ L GFP + ++F GDYVDRG LET LLLA+K+ P + F
Sbjct: 95 VVGDVHGQLHDVIFLLRDAGFPSDDRVFVFNGDYVDRGAWGLETFLLLLAWKVLLPNSVF 154
Query: 525 LLRGNHE---CASI 557
LLRGNHE C S+
Sbjct: 155 LLRGNHESKYCTSV 168
>04_03_0847 -
20254736-20254933,20256127-20256201,20257538-20257717,
20257802-20257869,20258563-20259125,20259198-20259235
Length = 373
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +3
Query: 348 IC-GDIHGQYYDLLRLFE--YGGFPPESN----YLFLGDYVDRGKQSLETICLLLAYKIK 506
IC GD+HG L L+ PP++ +FLGDY DRG + E I LLA +
Sbjct: 39 ICVGDVHGYISKLESLWANLQSALPPDAFATALVVFLGDYCDRGPSTREVIDFLLALPSR 98
Query: 507 YP-ENFFLLRGNHECA 551
+P + L GNH+ A
Sbjct: 99 HPAQRHAFLCGNHDLA 114
>12_02_0758 -
22858221-22858367,22859362-22859460,22859505-22859557,
22859674-22859728,22860204-22860284,22860779-22861213
Length = 289
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -3
Query: 489 GAGILFPTTACHGPHSLRGRDSWTPEGSHHTQTTLRGHSIVHVCHRKFSKELQVQV 322
G P P +L +++WTP + G+S H+C R+F+ + V++
Sbjct: 93 GGRTSLPCATISSPQALSRKETWTPYLLAVATNSSIGNSTRHICLRRFACKASVKL 148
>01_05_0343 + 21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 231 HLVLLV-IFLLRYRCLTHLCLCLPSDI 154
HLVLL+ +FLL C LC+ SD+
Sbjct: 1030 HLVLLIHLFLLSIACCVDLCMRFTSDV 1056
>10_03_0033 -
7248131-7248711,7248947-7249079,7249470-7249994,
7250545-7250764,7250913-7251145
Length = 563
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 450 PHSLRGRDSWTPEGSHHTQTTLRGH 376
P SL G W P GS ++ +RGH
Sbjct: 74 PGSLGGMRGWVPPGSSSSEGRVRGH 98
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 340 GASSSSSIGC-DKNISLDFKHSPLISISVN*TFIPGFSP-RTFSNFFI 203
G S S IGC + +I++ H P+ SIS N PG P NFF+
Sbjct: 83 GNGSCSGIGCCEASIAM---HIPVYSISANQVVDPGAGPDPNEPNFFV 127
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 IKKLLKVRGEKPGMNVQ--LTEIEIKGLCLKSREIFLSQPILLELEAPLK 347
+KK+L E P +N++ + E +++G + +S P+L ++APL+
Sbjct: 271 LKKMLSANPEAP-LNIECLMDEKDVRGFIKREEFEQISSPVLQRVKAPLE 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,678,135
Number of Sequences: 37544
Number of extensions: 327590
Number of successful extensions: 765
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -